3D Structure for MGV-GENOME-0139411_CDS_0032 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.53 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0139411_CDS_0032 1 AcrIE1 0.70 View Alignment MGV-GENOME-0139411_CDS_0032 M -T -F S E Y M -------Q ----L R -E ----R ----A -E -K A -G -I -G ----D D R C L A R L L H (60)
M S+ L + L+
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L -R -E S L E E A A S I -L -S L -I -V -F -Q A E T L S D Q A N E L A N
MGV-GENOME-0139411_CDS_0032 Y L Q -F Q ---E -V -V T -R N F Q A Y M N E M E A W C Q N I T K E V E A R I K E A E -V -K -E (111)
Y+ + RN + C ++ + +
AcrIE1 Y I R R Q G L E E A E -G A -C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D -A I D R D V D
MGV-GENOME-0139411_CDS_0032 2 AcrIC3 0.59 View Alignment MGV-GENOME-0139411_CDS_0032 M T F S E Y M ----Q ------L R -E --------------R ---A E K A G -I G ----D D R C L A -R (60)
M+ + + L + R +
AcrIC3 M S I Q V T S T N G R T V N L E I E L -G -S V V A S S G Q V K F M A D K T D R G L E S -R F L V P E A G N R R I E V A
MGV-GENOME-0139411_CDS_0032 -L -L H Y L Q F Q E V V T R N F Q A Y M N E M E A W C Q N I T K E V E A R I K E A E V K E (106)
+ L ++ A + E I A +
AcrIC3 L -T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q -I N K A -L E G
MGV-GENOME-0139411_CDS_0032 3 AcrIF23 0.59 View Alignment MGV-GENOME-0139411_CDS_0032 M -T F S E Y M ----Q -L R E -------------------------------------------(60)
M +F+
AcrIF23 M T N F Q T W L D S A D -I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0139411_CDS_0032 -------------R ----A E K A ----G -------I -G -D -D R C L A R L L H Y L ---Q F Q E V V (120)
+ L + + + +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E -K V Q Q M N Q D Q A E M A C -D -P S G L L T A A K F W I E N R N D S A Q E
MGV-GENOME-0139411_CDS_0032 T R N F Q A Y M N ----E M -E -A -W C Q -----N I T K E V E A R I K E A E V -K --E (168)
F + A + +
AcrIF23 I A G F V M Q Q K A L L A Q -H -R -S A K -A A G Q A D K V A K I A A E Y N A L -T A R W G F
MGV-GENOME-0139411_CDS_0032 4 AcrIE6 0.56 View Alignment MGV-GENOME-0139411_CDS_0032 M T F S E Y M -Q L R E R A E K A -G I G D D R C L A R L L H Y L ------Q F Q E V V T R N F Q A Y M N E M E A W C (60)
M ++ L + KA + D RL + V A
AcrIE6 M -N N D T -E V L E Q Q I -K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L
MGV-GENOME-0139411_CDS_0032 Q N I T K -E V E A R I K E A E -V --K E (82)
I ++ ++
AcrIE6 I E I L E E Q Y P G H A A D L S I K N L C P
MGV-GENOME-0139411_CDS_0032 5 AcrIIA11 0.54 View Alignment MGV-GENOME-0139411_CDS_0032 M T F S ---E Y M Q L R E ---R A E K ---A -G -------I -G --------------------D D R (60)
M + K D
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C -D D K A L A G R L A K I W G I L K G I T S D Y
MGV-GENOME-0139411_CDS_0032 C L A R L -L -----------H -Y L ----Q ---F -Q ---------------------------(120)
L
AcrIIA11 I L D N -Y R V W F K N N C P M V G -P L -Y D D V R F E P -L -D E E Q R D E L Y F G V A I D D K R R E K K Y V I F T
MGV-GENOME-0139411_CDS_0032 -----------------E V V T R ---------N ----F -Q -A ----Y M N E M E A W C Q N I T K E (180)
M E I
AcrIIA11 A R N D Y E N E C G F N N V R E V R Q F I N G W E D E L K N E E F Y K A -R -E -K K R Q E M E E A N N K F A E I M Q R
MGV-GENOME-0139411_CDS_0032 V E A R I K E A E V -K E (193)
++ + + +
AcrIIA11 A D E I L W -N -L K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;