3D Structure for MGV-GENOME-0135714_CDS_0023 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.33 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0135714_CDS_0023 1 AcrIE1 0.70 View Alignment MGV-GENOME-0135714_CDS_0023 M T E ----E -L D L L -G -------L --------L -I -D -K -I -E -Y E I I Q C K -D S L -K S A K H (60)
M + + Q L
AcrIE1 M E K K L S D -A Q V A -L -V A A W R K Y P D L R E S L E E -A -A -S -I -L -S L I V F Q -A E T -L S D ----
MGV-GENOME-0135714_CDS_0023 D I K K L E K S K A -D L L E T G I A D Y V F -D -N K I S S V I Y V K E T L E K R L N V L K K -I K Y R L V V S E -R (120)
+ L + + + + + + + + +
AcrIE1 Q A N E L A N Y I R R ----Q -----G -L -E -E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D
MGV-GENOME-0135714_CDS_0023 M F K S L -E (127)
+
AcrIE1 A I D R D V D
MGV-GENOME-0135714_CDS_0023 2 AcrIE6 0.70 View Alignment MGV-GENOME-0135714_CDS_0023 M T E E L D L L G -L -L I D K I E Y E I I Q C K -D -S -L -K -S -A -K -H D I K K L E K S K A D -L L E T G I A (60)
M+ L I +L
AcrIE6 M N N ---D T -E -V L E ----Q Q I ----K -A -F -E -L -L -A -D E L K D R L ----P T L -E I L S P M
MGV-GENOME-0135714_CDS_0023 D Y V F D N K I S S V I Y V K E T L E K R L N -V L K K I K Y R L V V S E -R M F K S L -E (106)
+ + + L +L ++ K+L
AcrIE6 Y T A V M V T Y D L I G K Q L A S R R A E L I E I L E E Q Y P G H A A D -L -S I K N L C P
MGV-GENOME-0135714_CDS_0023 3 AcrIIC4 0.58 View Alignment MGV-GENOME-0135714_CDS_0023 M T E E L D L L G L L I D -----K I -E Y E I I Q C K D S L K S A K -H -D I K -K L E K -S K -A D L L E T G I A (60)
M ++ K + ++ +K + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K -L S V L P K N H R E P I K G L F K -S -A V E -Q F S S -A R D F F K N E N Y S
MGV-GENOME-0135714_CDS_0023 D Y V F -D -N -K I S S V I Y V K E T L E K R L N V L K K I K Y R L V V S E R M F K S L E (106)
+ V + E L K + L E+ +
AcrIIC4 K E L A E -K -F N K E A V N E A V E K L Q K A I D -L ---------A E K Q G I Q -F
MGV-GENOME-0135714_CDS_0023 4 AcrIC3 0.58 View Alignment MGV-GENOME-0135714_CDS_0023 M T -E E L D L L G ---L L I D K I -E -Y E I I -Q C K D S L K S A K -H D I -K K L E -K -S K A D L L E -T G -(60)
M+ G L + ++K + + L + + E G
AcrIC3 M S I Q V T S T N G R T V N L E I E -L -G S V V -A -S S G Q V K F M A D K T -D R G L -E -S -R F L V P E A -G N
MGV-GENOME-0135714_CDS_0023 --I A D Y -V F D N K I S S V I Y V K E T L E K R L N V L K K I K Y R L V V S E R M F K -S -L -E (111)
I + + + L + + L + L
AcrIC3 R R I E V A L -T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K -A L E G
MGV-GENOME-0135714_CDS_0023 5 AcrIF23 0.55 View Alignment MGV-GENOME-0135714_CDS_0023 M T E E L D L L G ------L L I D --------K I -E -----------------------------(60)
MT L
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I -A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0135714_CDS_0023 -------------------Y -E I -I -Q C K D S L K S A K H D I K K L E K S K A D L L E T -G I A D Y V F (120)
Q D L +E+
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E -K V -Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R ---N D S A
MGV-GENOME-0135714_CDS_0023 D -N K I S S V I Y V K E T L E K R ----L N V L -K -K -I -K Y R L V V S E R M F K S -L -E (170)
I + L + ++++
AcrIF23 -Q -E I A G F V M Q Q K A L L A Q H R S A K A A G Q -A -D -K V A K I A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;