3D Structure for MGV-GENOME-0126549_CDS_0015 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.52 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0126549_CDS_0015 1 AcrIB1 0.82 View Alignment MGV-GENOME-0126549_CDS_0015 V T L G E D I E L D L I N F N D D N L E Q K -Y D I K N F K C -----T N E N I D D Y L Y N S A L K D F N E G L T V T (60)
L+N ++ +KNF+ T I+ L A+K ++ T
AcrIB1 M E -S K -N L R K L L N E Y E E --I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T
MGV-GENOME-0126549_CDS_0015 K L F I N K K N K D I V A Y F S L C S S A I V -Y K I -M ------------------G -K -L -H Y E P A I E (120)
+ +I+ YF++ + +V K
AcrIB1 Y V V F -S E D N E I L G Y F T I A N R S L V I P K E N F G I L S K T Q Q K K L G N S A A I L K N -G -D L M T S S F L
MGV-GENOME-0126549_CDS_0015 I K M F A V N E K Y Q H M K Y S E D E -E E L T L S D M I L S M V I G E I R D I G E K Y C G V K S V I L Y S -V -P E A (180)
+ N L +L+ + I VK + L P +
AcrIB1 L G Q L G K N Y S -D -D -I ----E -N L I T G R E L L T F A Y D L F L K I K -E L I N V K Y I W L E C Q N E P K L
MGV-GENOME-0126549_CDS_0015 Y N F Y D R N F F E D F N E Y M V K D Q G C F T N D C K A M Y M I -L (215)
+FY F K+M M
AcrIB1 I S F Y Q N F G F K M L E S L -T ---S -E -E G L K V M I M E L K
MGV-GENOME-0126549_CDS_0015 2 AcrVA5 0.59 View Alignment MGV-GENOME-0126549_CDS_0015 V T L G E D I -E L D -L I N F -N D D N L E Q K Y D I K N F K C T N E N I D D Y L Y N S A L K D F N E G L T V T K L F (60)
E
AcrVA5 M -K I E L -S G G Y I C -Y S I -------------------E -----------------------
MGV-GENOME-0126549_CDS_0015 I N K K N K D I V A Y F S L C S S A I V Y K I M G K L H Y E P A I E I K M F A V N E K Y Q H M K Y S E D E E -E L T L S (120)
+ I M V+ +
AcrVA5 -----E ------------------------D E V T I D M V E V T -T -K ---------R -Q G I G
MGV-GENOME-0126549_CDS_0015 D M I L S M V I G E I R D I G E K -Y C G V K S V I L Y S --------V -P E A Y N F Y D R N F F E D F N E Y M V K (180)
++ MV +R+ G + LY ++ FY N FE +
AcrVA5 S Q L I D M V K D V A R E ----V --G -L P I G L Y A Y P Q D D S I S -Q E D L I E F Y F S N D F E Y D P D -D --
MGV-GENOME-0126549_CDS_0015 D Q G C F T N -D C K A M Y M I L (197)
++M
AcrVA5 -----V -D -G R L M R W -S
MGV-GENOME-0126549_CDS_0015 3 AcrVA4 0.43 View Alignment MGV-GENOME-0126549_CDS_0015 V T L -G ------E -D -I --------E L D ---------L ----I N F N -D D -N L E Q K -Y -D --(60)
+ D +
AcrVA4 M Y E I K L N D T L I H Q -T D D R V N A F V A Y R -Y L L R R G D L P K C E N I A R M Y Y D -G K V I K -T -D V I D
MGV-GENOME-0126549_CDS_0015 ---I K N ----F K -C T -N E N I D D Y L Y N ----------------S A L K ----D F N E G L T V T K (120)
+++ K + N+ I + F++ +K
AcrVA4 H D S V H S D E Q A -K V -S N N D I I K M A I S E L G V N N F K S L I K K Q G Y P F S N G H I N S W F T D D P V K S K
MGV-GENOME-0126549_CDS_0015 L F I N K ---K N -----------K D -------I -V A Y F S L C S S A I V Y K I M G K L H -Y E P A -I -(180)
N K+ +
AcrVA4 T M H N D E M Y L -V V Q A L I R A C I I K E I D L Y T E Q -L Y N I I K S L P Y ---------D -K -R -P N V V
MGV-GENOME-0126549_CDS_0015 E -I K M F A V -N E K Y Q H M K Y S E D E E E L T L S D M I L S M V I G -E I R D I G E K Y C G V K S -V I L Y S V P (240)
+ + + V G + S
AcrVA4 -Y S D Q P L -D P N N L -D L -----S ----E P E L W A E Q V -G E C -M R Y A ---H N D Q P C F Y I G S T K
MGV-GENOME-0126549_CDS_0015 E A Y N -F Y D R N F F E D F N E Y M V K D Q G C -F -T N D -C -----K A M Y M I -L (286)
N G + +
AcrVA4 ---R E -L R V N Y I ---V P V I ----G -V -R -D E I E R V M T L E E V R N L H K
MGV-GENOME-0126549_CDS_0015 4 AcrIC11 0.42 View Alignment MGV-GENOME-0126549_CDS_0015 V T L G E D I -E L D L I N F N D D N L E Q K Y D I K N -F K C -T N E N I D D Y L Y N S A L K D F N E -G L -T V T K (60)
+ I ++ +D + F + + +L+ T
AcrIC11 M N K E T Q I T A S A V V G --E D K R L --E F L S K H F G V R F A R R G E A L V F A W L L R L A K V P I E W T R L Q
MGV-GENOME-0126549_CDS_0015 L F I N K K N K D -I V A Y F S L C -S S A I V Y K I M G K L H Y -E P A I E I K M F A V -N ---E K Y Q H M K Y S E (120)
+A + + + + +
AcrIC11 Y Y T L S N -S G F Y L A P ----R -E L R --I S -E C E L S A D A V G I V A T M L T L R Q L A H E S A A C V -E -
MGV-GENOME-0126549_CDS_0015 D E E E L -------T -L -S -D -M -I L S M -V I G E I R D I G E K -Y C G V K S V I L Y -S V P E A Y N F Y D (180)
+ +
AcrIC11 A D -S T Y P A A K L A V T -A -S -V -K -F A Q Q -Y H H L A A ----Y ----------S --V ---K ---
MGV-GENOME-0126549_CDS_0015 R N F F E D F N E Y M V K D Q G C F T N D C K A M Y M I -L (210)
+ Y +
AcrIC11 ----------H -------A -E S I N I Y R A I D
MGV-GENOME-0126549_CDS_0015 5 AcrVA2 0.41 View Alignment MGV-GENOME-0126549_CDS_0015 V T --L --G E D ----I -----------E L D --------L I N F -----N D D N L E Q K ------(60)
+ D L
AcrVA2 M H H T I A R M N A F N K A F A N A K D C Y K K M Q A W H L L N K P K H A F F P M Q N T P A L D N G L A A -L Y E L R G
MGV-GENOME-0126549_CDS_0015 -Y D ----------------I ---K N F K C T N ----E -N -I -D -D Y L -Y -N -S A -------L (120)
+ + +
AcrVA2 G K E D A H I L S I L S R L Y L Y G A W R N T L G I Y Q L D E E I I -K -D -C -K E L -P -D -D T P T S I F L N L P
MGV-GENOME-0126549_CDS_0015 K -D -F N E G L T V T K L F I N -K --K N -K -D -I -V A Y F S ---L C S S A -I V Y K I M ----G K -L H Y (180)
++ + + + + I +
AcrVA2 D W -C V Y V D I S S A Q I A -T F D D G V -A -K -H -I K G F W A I Y D I V E M N G I N H D V L D F V V D -T -D T
MGV-GENOME-0126549_CDS_0015 E P A I E -I K -M F A V N E K Y Q H M K Y S E -D E E E L T L S D -----M I L -S -M V I G E I R D I G E K Y C G (240)
+ + F+ + E L +I + C
AcrVA2 D D N V Y V P -Q P F I -L S S -----G Q S V -A E V L D Y G A S L F D D D T -S -N T L I K G L L P Y L L W L C V
MGV-GENOME-0126549_CDS_0015 -V K S V I L Y S V P E A Y N F Y D R -N F F E D F N E Y M V K D Q G C F T N -D C ------------------ (300)
+ +P K +G F +
AcrVA2 A E P D I T Y K G L P V ----S R -E E -L T R P K H S I N K K T G A F V T P S E P F I Y Q I G E R L G S E V R R Y Q
MGV-GENOME-0126549_CDS_0015 ------------------------------------------K A M -Y --M -I -L (354)
A +
AcrVA2 S I I D G E Q K R N R P H T K R P H I R R G H W H G Y W Q G T G Q A K E F R V R W Q P A V F V N S G R V S S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;