3D Structure for MGV-GENOME-0099078_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.02 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0099078_CDS_0002 1 AcrIE6 0.75 View Alignment MGV-GENOME-0099078_CDS_0002 M S E S I L Q R I E Q E Q I I D T K Y E H L -A A E Y A R I S G S R K Y M L V I K -Q ----F D T E M Y N S N K S H I (60)
M+ + EQ + + ++ Y +
AcrIE6 M N -N --D T E V L E Q Q ----I K A F E -L L A D E L K D R L P T L E I L -S -P M Y T A V M V T Y D L I G K Q L
MGV-GENOME-0099078_CDS_0002 D N E L E R L D I E S E R -L L T E L E E L I N N K -E S -V (91)
+ L E + +L
AcrIE6 A S R R A E L I E I L E E Q Y P G H A A D L S I K -N -L C P
MGV-GENOME-0099078_CDS_0002 2 AcrIE1 0.67 View Alignment MGV-GENOME-0099078_CDS_0002 M S ---E S -I -L Q -R -I E -------Q ----E Q I I D T K Y E H L A A E Y A R I S G S R K Y M L V I K -Q (60)
M + + + + ++ +S + +
AcrIE1 M E K K L S D A -Q V -A -L V A A W R K Y P D -L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R
MGV-GENOME-0099078_CDS_0002 F D T E M Y N S N K S H I D N E L E R L D I E S E R L L T E L E E L I N N K -E -S -V (104)
E ID + + + + +
AcrIE1 Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
MGV-GENOME-0099078_CDS_0002 3 AcrIIC4 0.62 View Alignment MGV-GENOME-0099078_CDS_0002 M S --E S -I L Q R --I E ---Q ----E Q I I D T K Y E -H -L A -A -E -Y A R I S G S R K Y M L V I K Q F D (60)
M S ++ E S R +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G -L F -K -S -A V E Q F S S A R D F F K -N E N Y -
MGV-GENOME-0099078_CDS_0002 T E M Y -N -S N K -S -H I D N E L E R L -D I E -S E -R -L L T E L E E L I N N K -E S V (108)
+ L+ + +L+ +
AcrIIC4 ---S K -E -L A E -K F N K E ----A V N E -A -V E -K -L Q K A I D L A E K Q G I Q F
MGV-GENOME-0099078_CDS_0002 4 AcrIF23 0.60 View Alignment MGV-GENOME-0099078_CDS_0002 M S E --S I -L Q -R ----I E ---Q --------------------------E -----------(60)
M+ +
AcrIF23 M T N F Q T W L D -S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0099078_CDS_0002 -----Q -------I ----I D T K ----Y E H L A A ----E Y A R I S G S R K Y M L V I K Q F D ---T E (120)
+ I A + + K + ++
AcrIF23 G G R A L T G T A R Q K E -W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I A
MGV-GENOME-0099078_CDS_0002 -M Y N S N K S H I D N E L E R L -D I E S E R L L T E -L -E -E L I N -N K -E S --V (166)
+ + + + + + N
AcrIF23 G -F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I -A -A -E Y N A -L T A R W G F
MGV-GENOME-0099078_CDS_0002 5 AcrIC3 0.56 View Alignment MGV-GENOME-0099078_CDS_0002 M S E S I L -Q R ---I ---E Q -E Q --I I D T K Y E H L A A E -------Y A -R I S -G S R K -Y M L -V I (60)
MS ++ + + + + A
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G L E S R F L V P -E A G N -R -R -I -E
MGV-GENOME-0099078_CDS_0002 K -Q ----F D T -E M Y N S N K S H I D N E L E R L D I E S E R L L T E L E E L I N N K E S V (109)
D N S + +E L E + E
AcrIC3 -V -A L T G R D L E -A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E -G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;