3D Structure for MGV-GENOME-0068227_CDS_0008 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.56 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0068227_CDS_0008 1 AcrIE1 0.71 View Alignment MGV-GENOME-0068227_CDS_0008 M D E ---N -F K -K -------L ----A ----E -S ----L -K ---I ----T E Q S V R Y A A K Y T G (60)
M+ E ++ +A Y
AcrIE1 M E K K L S D A Q -V -A L V A A W R K Y P D L -R E S L E E -A A S I -L S L I V F Q A E T L S D Q A N E L A N Y I R
MGV-GENOME-0068227_CDS_0008 N E T G L L L -E -S C A -D -T I -Q -A Q -M K -M -I -E N L S V K F E -T -E K S I K N R A F D F I G K K G M M (120)
A + + + ++
AcrIE1 R Q ---G -L -E -E A E -G -A C -R -N I -D I -M -R A K W ---V -E -V C G E V N Q H G I R V -Y G D -A I
MGV-GENOME-0068227_CDS_0008 D E F Y Q K (126)
D
AcrIE1 D R D V -D
MGV-GENOME-0068227_CDS_0008 2 AcrIE6 0.66 View Alignment MGV-GENOME-0068227_CDS_0008 M D E N F K ---K L A E S L K I T E Q -S V R Y A A K Y -T G -----N E T G L L L E S C A D T I Q A Q M K M I -E (60)
M + + + + + + ++ +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I -L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I -
MGV-GENOME-0068227_CDS_0008 N -L S V K F E T E K S I K N R A F D -F I G K K G M -M D E F Y Q K (95)
L A D
AcrIE6 E I L E E Q Y P G H ------A A D L ------S I -K N L -C P
MGV-GENOME-0068227_CDS_0008 3 AcrIC3 0.60 View Alignment MGV-GENOME-0068227_CDS_0008 M D -E N F K K ---L A E ---S L K ---I -------T E Q S V R Y A A K ----Y -T ----G -N E T -G L (60)
M + L + + G +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G L -E S R F -L -V P E A G N R R I E V A
MGV-GENOME-0068227_CDS_0008 L L E S C A D T I Q A Q M K M I -E -N L -S -V -K F E T E K S I K N R A F D F I G K K G M M D E F Y Q K (114)
L + L + + +
AcrIC3 L -------T G R D L E A A N -A -L F -S -E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
MGV-GENOME-0068227_CDS_0008 4 AcrIF23 0.56 View Alignment MGV-GENOME-0068227_CDS_0008 M D E N F K K L A E -S L K I -------T E -Q --S V -R -Y -A A K -------Y ----T --------G (60)
M NF ++ +
AcrIF23 M T -N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I -A -Y -D P S Y N Y A A N T R R A S L S P R G I D A R A V A
MGV-GENOME-0068227_CDS_0008 ----N ----E T -G -L -L L -E -S C -A D T I Q A Q M K M I E N L S V K F -E -T E ----K ----S -I K (120)
+ ++
AcrIF23 K T F G G R A L T G -T -A -R Q -K -E -W A E K I R A E K V Q Q M N Q D Q A E M A -C D -P S G L L T A A K -F W I
MGV-GENOME-0068227_CDS_0008 N ----R A -F D F -I -G -K ----K ------------G ----------M -M D E F Y ---Q -K (178)
+
AcrIF23 E N R N D S -A Q E -I -A -G -F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W -G F
MGV-GENOME-0068227_CDS_0008 5 AcrIF12 0.53 View Alignment MGV-GENOME-0068227_CDS_0008 M -D --E N -F K -K ----L ---A E S L K I -----------T ----E -Q -S -V -R -Y -A A K ---(60)
M + AE+ + A
AcrIF12 M A Y E K T W H -R D -Y A A E S L K R A E T S R W T Q D A N L E W T Q L -A L E C -A -Q -V -V -H -L A R Q V G E
MGV-GENOME-0068227_CDS_0008 Y T G -N E T G L L L E S C A D T I Q A Q M K -M I E N -----L -S -V -K -F E T -E K S I K N R A F D F I G -K (120)
G ++++ + TI A + + + + + G
AcrIF12 E L G N E K I I G I A D T V L S T I E A H S Q A T Y R -R P C Y K -R -I -T -T -A Q T -H L L A V T L L E R F G S A
MGV-GENOME-0068227_CDS_0008 ------K -G ----M -M -D E F Y Q K (143)
D
AcrIF12 R R V A N A -V W Q L T D D E -I D Q A -K A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;