3D Structure for MGV-GENOME-0055034_CDS_0005 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.36 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0055034_CDS_0005 1 AcrIE1 0.71 View Alignment MGV-GENOME-0055034_CDS_0005 M D E ---N -F -K -K -L A ---E ----------S ----L K I -T E S N I R Y V A K Y T -G N D T G L L L (60)
M+ L+ L ++ + +
AcrIE1 M E K K L S D A -Q -V -A L V A A W R K Y P D L R E S L E E A A S I L S -L I V F Q A E T L S D Q -A N E L A N Y I R
MGV-GENOME-0055034_CDS_0005 T A C A D T I Q A Q M K M I E Y L S V K -F E T E -K -S -V K K R A F D F I S K -K G L -M D E F Y Q K (113)
++ + + I+ +K V + + D
AcrIE1 R Q G L E E A E G A C R N I D I M R A K W -V E V C -G -E V N Q H G I R V Y G -D --A I -D R D -V D
MGV-GENOME-0055034_CDS_0005 2 AcrIC3 0.61 View Alignment MGV-GENOME-0055034_CDS_0005 M D -E N F K K L A ---E -------S L K I -------T E S -N I R Y -V A K --Y T ----G N -D T G L L (60)
M S+ + + GN
AcrIC3 M S I Q V T S T N G R T V -N L E I E L G S V V A S S G Q V K F M A D K -T D R G L E S R F L -V P E A G N R R I ---
MGV-GENOME-0055034_CDS_0005 L -T -A C A D T I Q -A Q -M -K -M I -E -Y L -S -V -K F -E -T E -K S V K K -R A F D F I S K K G L M D E F (120)
+ + L + + +
AcrIC3 E V -A L T G ----R D -L -E -A -A N -A -L F -S -E -L A -A S -V E A T N -E M Y R E L D A E R A Q I N K A
MGV-GENOME-0055034_CDS_0005 -Y Q K (124)
AcrIC3 L -E G
MGV-GENOME-0055034_CDS_0005 3 AcrIE6 0.60 View Alignment MGV-GENOME-0055034_CDS_0005 M D E N F K K L A E S L K I -T -E S N -I R Y V A K Y T G -N D T G -L L L -T --A -C A -D -T I Q A Q M K M I E (60)
M L +A L
AcrIE6 M N N D T E V L E ---Q -Q -I K A -F E L -L A D E L K D R -L P T L -E I -L S P M Y -T -A V M V T Y D L I G K
MGV-GENOME-0055034_CDS_0005 Y L S V K F E T E K S V K K R A F D -F I S -K K G L M D E F Y Q K (94)
L + + +
AcrIE6 Q L A S R R A E L I E I L E E Q Y P G H A -A -D L S I K N -L C P
MGV-GENOME-0055034_CDS_0005 4 AcrIF23 0.56 View Alignment MGV-GENOME-0055034_CDS_0005 M D E N F K K ----L ---A -E ----S L K --------I --------------------------(60)
M NF + + +
AcrIF23 M T -N F Q T W L D S A D I P V Q -Q N G Q W I -D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K
MGV-GENOME-0055034_CDS_0005 T E --------S N I R Y -V A K Y -T -------G N D T G L L L T A C A -D T I Q A Q M K M I E ---Y L --(120)
T + + +D+ + ++A IE
AcrIF23 T F G G R A L T G T A R Q K E W A E -K I R A E K V Q Q M N Q D Q A E M A C D P -S G L L T A A K F W I E N R N D S A Q
MGV-GENOME-0055034_CDS_0005 --S -V -K -F -E -T -E K -S V -K K -R A F D ---F I S K ----K ---G -L -M D E F Y ---Q K (176)
AcrIF23 E I -A -G -F -V -M -Q -Q K A -L L -A Q H R S A K A A -G -Q A D K V A K I A A -E Y N A L T A R W G F
MGV-GENOME-0055034_CDS_0005 5 AcrIF12 0.55 View Alignment MGV-GENOME-0055034_CDS_0005 M -D --E N -F K -K -L ---A ---E S L K ----I -----------T ----E S N I R Y V A K Y T G -N (60)
M + + + E+ + +R V G
AcrIF12 M A Y E K T W H -R D -Y A A E S L K R A E T S R W T Q D -A N L E W T Q L A L E -C A Q V V H L A R Q V G E E L G N E
MGV-GENOME-0055034_CDS_0005 D T G L L L T A C A D T I Q A Q -M K ----M -----------I -E -Y -L S V -K F E ----T -E -K -S -(120)
++ + TI A V
AcrIF12 K I I G I A D T V L S T I E A H S Q A T Y R R -P C Y K R I T T A Q T -H -L -L -A V T L -L E R F G -S -A -R -R
MGV-GENOME-0055034_CDS_0005 V -K -K R -A -F D F I S K K --G -L M D E F Y Q K (148)
+ D
AcrIF12 -V -A -N A -V -W Q L ---T D -D E I D Q A -K A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;