3D Structure for MGV-GENOME-0036643_CDS_0026 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.43 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0036643_CDS_0026 1 AcrIB1 0.90 View Alignment MGV-GENOME-0036643_CDS_0026 V Y K V V S L T N L ---I E A L D K E E L E K I I L S F K S N S A H P N D I E I F L H K K A I Q F E R A A I A S T Y L (60)
+L L E +D E K S K++ NDIEIFLH KAI FE+ I STY+
AcrIB1 M -E S K N L R K L L N E Y E E I D I N E M L K N F R S I K N S -G T K N D I E I F L H E K A I K F E K S S I S S T Y V
MGV-GENOME-0036643_CDS_0026 V F E R E T N I L V G F F S L A N K P L T M S K R N F D A L S N N Q Q N K L K Q H G R A -I G Q K F Q I N S Y L I G Q L (120)
VF E N ++G F++AN+ L K NF +LS +QQ KL + + +S L+GQL
AcrIB1 V F S -E D N E I L G Y F T I A N R S L V I P K E N F G I L S K T Q Q K K L G N S A A I L K N G D L M T S S F L L G Q L
MGV-GENOME-0036643_CDS_0026 G K N F S K E A S N L I T G G D L L T L A F D K V E E A S N I I R A K Y V W L E C E N H P K L I N F Y S S F G F K T I A (180)
GKN S ++ NLITG +LLT A D + +I +KY+WLEC N PKLI+FY++FGFK +
AcrIB1 G K N Y S D D I E N L I T G R E L L T F A Y D L F L K I K E L I N V K Y I W L E C Q N E P K L I S F Y Q N F G F K M L E
MGV-GENOME-0036643_CDS_0026 P N A S K D E L V V M I L K I K (196)
S + L VMI +K
AcrIB1 S L T S E E G L K V M I M E L K
MGV-GENOME-0036643_CDS_0026 2 AcrVA5 0.58 View Alignment MGV-GENOME-0036643_CDS_0026 V Y K V V S L T N L I E A L D K E E L E K I I L S F K S N S A H P N D I E I F L H K K A I Q F E R A A I A S T Y L V F E (60)
K+
AcrVA5 M -K I E L ------------------------------------------------------
MGV-GENOME-0036643_CDS_0026 R E T N I L V G F F S L A -N K P L T M S K R N F D A L S N N Q Q N K L K Q H G R A I G Q K F Q I N S Y L I G Q L G K N (120)
G I + +
AcrVA5 -S ----G G Y I C Y S I ---E -------------------------E -----D E V T I D M V E V T
MGV-GENOME-0036643_CDS_0026 F S K E A S N L I T G G D L L T L A F D K V E E A S N I -I R A K Y V W L E C E ---N ---H P K L I N F Y S S F G F (180)
G L+ + D + E + L LI FY S F
AcrVA5 ---T -K R Q G I G S Q L I D M V K D V A R E ----V -G -L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F
MGV-GENOME-0036643_CDS_0026 K T I A P N A S K -D E L V V M I L K I K (201)
+ +M
AcrVA5 E Y D P D -D --V -D G R L M -R W -S
MGV-GENOME-0036643_CDS_0026 3 AcrIB5 0.40 View Alignment MGV-GENOME-0036643_CDS_0026 V Y K V V S L T N L I E A L D K E -E L E K I I L S F K -S N S A H P N D I E I F L H K K A -I Q F E R A A I A S T Y L (60)
+ ++ L
AcrIB5 M A G --F I K K Y L D -----S -R ----G ---W --------T I Y Q L G N A T G -L -----------
MGV-GENOME-0036643_CDS_0026 V F E R E -T -N -I -L V -G F -F S L A N K P L T M S K R N F -D -A -L S N N Q Q N K L K Q H G -R A I -G -Q -(120)
+ S + + +I
AcrIB5 -----A -H -Q -T -I R S -A D S -K T -V --------D -Q -L ----S A ----K N V R -L I A -E -V
MGV-GENOME-0036643_CDS_0026 K -F -Q -I N S Y L -I G Q L G K N F S K E A S N L I T G G D L L ---T -L A F ----D K V E E A S N I I -R A K (180)
+ + IT ++L T +F +E+S+ +
AcrIB5 -F -H -F -T A G E I L D E F Y E -I ----E E E I T N D E I L K E L T T -V F E K H G H N T D E I S S E L L D G E
MGV-GENOME-0036643_CDS_0026 Y V W L E C E N ----H P K L I N F Y S S -F G -F K T -I A P N A -S K D E L V V M I L -K I -K (231)
+ KL+ + F + + +
AcrIB5 T I -K L D M -T D D N I T K L A D A V N -A T E H F T A Y L D ---S --S T D Y M I V -E -A T Q
MGV-GENOME-0036643_CDS_0026 4 AcrVIA1_Lse 0.40 View Alignment MGV-GENOME-0036643_CDS_0026 V Y -K V ---V S L T N L I E A -L D K E E L E K I I ---L S F K S N S A H P N D I E I F L H K K A -I -Q -F -E (60)
+ + E KE +E +I + + K
AcrVIA1_Lse M I Y Y I K D L K V K G K I F E N L M N K E A V E G L I T F L K K A E F E -I Y S R E N Y S K Y N K W -F -E -M -W -
MGV-GENOME-0036643_CDS_0026 R A A I A S T Y L V F E R E T N I -L V -G F F S -L A --N -K P L T M S K R N F D A L S N N Q Q N K L K -Q H G R A (120)
+ S + + L + + +
AcrVIA1_Lse K S P T S S L V F W --K N -Y S F -R C H L L F V I E K D -G E C L G I ---P A S -V F E S V L Q I Y L A -D P F -
MGV-GENOME-0036643_CDS_0026 I G Q K F Q ------------I N S Y L -I G Q L G K N F S K E -A S -------N L I ---------T G G (180)
+ + + S N
AcrVIA1_Lse A P -D T K E L F V E V C N L Y E C L A D V T V V E H F E -A E ---E -S A W H K L T H N E T E V S K R V Y S K D D -
MGV-GENOME-0036643_CDS_0026 -D L L -T -L A F D K V E E A S N I -I R A K Y V W L E C E N H P K L -I N F Y S S -F G F K T I -A P -N A S -K - (240)
+L + + ++ + + + + I
AcrVIA1_Lse D E L -L -K Y I P E F L D T I -A T N K K S Q -K ------Y N Q I Q -G K I Q -E I N K -E I A -T L Y E -S -S
MGV-GENOME-0036643_CDS_0026 ------D E ---------------L -V V M I L K I K (273)
+ + +
AcrVIA1_Lse E D Y I F T E -Y V S N L Y R E S A K L E Q H S K Q I L K E E L N
MGV-GENOME-0036643_CDS_0026 5 AcrIC11 0.38 View Alignment MGV-GENOME-0036643_CDS_0026 V Y -K -V V S L T N L I E -A L D K E E L E K I I L S F K S N S A H P N D I E I F L H K K A I Q F E R A A -I A -S T (60)
++++ + + + E+ + ++ ++
AcrIC11 M N K E T Q I T A S A ---V -V G E D K R L E F L S K H F G V -R F A R R G E A L V F A W L L R L A K V P I E W T R L
MGV-GENOME-0036643_CDS_0026 Y L V F E R E T N I L V G F F S L A N K P L T M S K R N F D A L S N N Q Q N K L K Q H G R A I G Q K F Q I N S Y L I G Q (120)
GF + S ++ +
AcrIC11 Q Y Y T L S N ----S G F Y L A P R E L R -I S --E -C E -L -----------------S A D A V G I V A T
MGV-GENOME-0036643_CDS_0026 L G K ------N F S K E A S -N -L ----I ----T -G -G -D L -L T -L A F D K V E E A S N I I R A K Y V W (180)
+ ++
AcrIC11 M L T L R Q L A H E S A A C V E A D S T Y P A A K L A V T -A -S -V K -F -A Q Q -Y H H L A A Y ----------
MGV-GENOME-0036643_CDS_0026 L E -C -E N H P K L I N F Y S S F G F K T I A P -N A S K D E L V V M I L K I K (221)
E + I
AcrIC11 --S -V -K ------------------H ----A E S I N I Y R A I D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;