3D Structure for MGV-GENOME-0034029_CDS_0019 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 91.04 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0034029_CDS_0019 1 AcrIIA34 0.83 View Alignment MGV-GENOME-0034029_CDS_0019 M -L P I N E Q ---E --------I -L -------V ----D N -L -Q E -V -E -T -I L -F N L S E Q L -(60)
M +NE + D + +
AcrIIA34 M K N I A N E I K T I R Y A F E D G R S -T -Q K S I M R K I K A L T D -Q -F E -T -M -D -D L -I D -S L N S Y A
MGV-GENOME-0034029_CDS_0019 G S R D E L G K A ---W Y I -V Y K R L Q K ----E K A -----K E --A I -----------M K G -----(120)
++ Q
AcrIIA34 D T H Y T W A I T Y F Q L A R I -I I S F Q A S N N T T S E K K I D L Q -S G P -I E V N G K L K I R V T V -D E F M A
MGV-GENOME-0034029_CDS_0019 --------E ---I Y N -K K R (139)
E
AcrIIA34 D L A N W E H L E D I K K L A K E L A
MGV-GENOME-0034029_CDS_0019 2 AcrIF15 0.83 View Alignment MGV-GENOME-0034029_CDS_0019 M L P I N E Q E -I L V D N L Q E V E T -I -L -F -N L S E Q L -G S R -D E L G K A W Y I -V Y K R L Q K ----E (60)
M I+ + D + E+ G +
AcrIF15 M T T I T I A Y E V S N D K V E ----T -I -K -T -M V E S Q Q I H N V N F N G -E E F T I E R -G D F T S I D K D
MGV-GENOME-0034029_CDS_0019 K A K E -A ---I M K G E I Y N K K R (80)
A + +I
AcrIF15 E A E -H V K L L N K I Q D I I H G Y S
MGV-GENOME-0034029_CDS_0019 3 AcrIIA19 0.83 View Alignment MGV-GENOME-0034029_CDS_0019 M L -P I N E Q E I ----L -------------------V -D -N -L -Q E V -E T I L F N L S E Q L G S R (60)
M + E + + + LSE
AcrIIA19 M K L I V E V E E T N Y K N -L V N Y T K L T N E S H N I L V N R L I S -E -Y -I T K -P Y E L R L D L S E R -Y --
MGV-GENOME-0034029_CDS_0019 -D E L G K A W Y I V Y K R L Q K ----E K A K E A I ------------------------M K G ----- (120)
+ K +KE++
AcrIIA19 S N R D L I E F K F M L I E Y C K E A L Q -D I K E L A N S D E A Y E T D E A F E A V F R Q L F E E V I S N P D T V L K
MGV-GENOME-0034029_CDS_0019 ----E -I Y N -K K R (133)
+
AcrIIA19 A F H S Y T S F L E E N K
MGV-GENOME-0034029_CDS_0019 4 AcrVIA1_Lwa 0.82 View Alignment MGV-GENOME-0034029_CDS_0019 M L -P I N E Q ------E -I L V D N ---L Q E V E T ----I -L -F N -L -S E Q L G S R D E L G K A W Y I V (60)
M ++ EQ + +
AcrVIA1_Lwa M E K I K L I C L R I N N D -E L I T T D K D E W L K F I K R H R G -K -V S -S -I -E Q F N W K I ----P G N K L
MGV-GENOME-0034029_CDS_0019 Y K R -L Q -K E K A K E A I M K --G -E I Y N K K R (88)
+ E+ E
AcrVIA1_Lwa -Q K A -L E -Y S F D E L Y K F K Q -K E N R R E T D
MGV-GENOME-0034029_CDS_0019 5 AcrIE1 0.81 View Alignment MGV-GENOME-0034029_CDS_0019 M -L -P I N E ---Q E ----I ----L -----V -D -N --------L ----Q E V E T I L F N L S E Q -(60)
M + + L
AcrIE1 M E K K L S D A Q V A L V A A W R -K Y P D -L R E S L -E -E -A A S I L S L I -V F Q A E T L S D Q A N E L A N -Y
MGV-GENOME-0034029_CDS_0019 L -G S R --D E ----L G K -A -W -Y I -V Y K -R L Q K -E K A K -E -A -I -M K G -----E I Y N K K -R (120)
E + + E +G ++ +
AcrIE1 -I R R -Q G L E E A E G A C -R -N -I -D I M -R A -K W -V E V -C G -E -V -N Q H G I R V Y G D A I D R D V D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;