3D Structure for MGV-GENOME-0010873_CDS_0011 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.87 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0010873_CDS_0011 1 AcrIE6 0.74 View Alignment MGV-GENOME-0010873_CDS_0011 M M H K T W N V R D Q T T E A L E E L L I R K L K E I D D N Y K M L K K V -S ---N I E D A K K L V D E M W R I -R S (60)
M TE+LE + +D+ L + + D +
AcrIE6 M -N N D -------T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A -
MGV-GENOME-0010873_CDS_0011 F -A N E I D L E -L I R R -D ---Y E N --G --T -T S (91)
E+ L +
AcrIE6 S R R A E L I E -I L E E -Q Y P G H A A D L S -I K N L C P
MGV-GENOME-0010873_CDS_0011 2 AcrIE1 0.62 View Alignment MGV-GENOME-0010873_CDS_0011 M M H K ---T W N V R D Q ----------T T ----E -A -L -E -E -L -L -I ---R K L K E I D D -N Y K (60)
M +K + + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A -S -I -L -S -L -I -V F Q A E T L S D Q A N -E L A N
MGV-GENOME-0010873_CDS_0011 M L K K -V S N I E D A K K L V D E M W R I R S F A N E I D L E L I R R D Y E N -----G --T T S (111)
++ + +E+A + R E+ E+ +
AcrIE1 Y I R -R -Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I -D R D V D
MGV-GENOME-0010873_CDS_0011 3 AcrIIC4 0.59 View Alignment MGV-GENOME-0010873_CDS_0011 M M -H K T W N --------V ---R -D -Q ----T T E A L E E L L I R K L K E I D D N Y K M L K K -V S N I E (60)
M + E + L + K + E
AcrIIC4 M K I T S S N F A T I A T S E N F A K L -S -V -L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E
MGV-GENOME-0010873_CDS_0011 D A K K L V -D E M W R I -R S F -A N -E -I D L E L I R R D Y E N G T T S (99)
A K + + +I +G +
AcrIIC4 L A E K F N K E ----A V N E -A -V E -K -L Q K A I D L A E K Q G I Q F
MGV-GENOME-0010873_CDS_0011 4 AcrIF23 0.59 View Alignment MGV-GENOME-0010873_CDS_0011 M M -H K ----T -W N -----------V R D ----------------------------Q ----(60)
M + +
AcrIF23 M T N F Q T W L D S A D -I P V Q Q N G Q W I D L E -T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
MGV-GENOME-0010873_CDS_0011 ------------------T T E A L E -E L ----L ----I R K L K E I D D -N Y K -M L K K V S -N I E (120)
+ + K + + ++
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K -V Q Q M N Q D -Q A E M A C D P S G L L T A A -K F W I E N R N D S A Q
MGV-GENOME-0010873_CDS_0011 D A K K L V D E M W R I R S F A N E I D L E L -----I -R -R -D ----Y E N G T T --S (168)
++ V + + +
AcrIF23 E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V -A -K -I -A A E Y N A L T A R W G F
MGV-GENOME-0010873_CDS_0011 5 AcrIIA28 0.54 View Alignment MGV-GENOME-0010873_CDS_0011 M M H -K -T ---W N -V -R D Q T T E A L E E L L I R K L K E I D D N Y K M L K K V S ----N I E D A K K L V D E (60)
M D + E EL K ++ KK + +
AcrIIA28 M K T I F T K K Q T E E L -L N D I S I E K Q K E L F N S M H D F R S Q H A K E A R I P G W S D K Y N K L E K K M L S D
MGV-GENOME-0010873_CDS_0011 M W R I R -S F A N E I D L E L I R R D -Y E N -G T --T S (91)
+ ++ ELI D + +S
AcrIIA28 F E E V T G I K Y D T L E S E L I W -D N -L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;