3D Structure for MGV-GENOME-0010787_CDS_0003 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.50 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0010787_CDS_0003 1 AcrIE6 0.75 View Alignment MGV-GENOME-0010787_CDS_0003 M L H K T W N V R D Q T E E D L R L E A D K L Y R E I E A E Y K I I K -K -I ----S D K E E A H K I I D R I W I M K (60)
M E L + ++ + + D I
AcrIE6 M -N N D -------T E V L E Q Q I K A F E L L A D E L K D R L P T -L -E I L S P M Y T A V M V T Y D L I G K Q L
MGV-GENOME-0010787_CDS_0003 -K -W -A N D -I -Q L E -L M R K E ----Y -N -N ---E -A (95)
L
AcrIE6 A -S -R R A -E -L I E -I L E E Q Y P G H A A D L S -I K N L C P
MGV-GENOME-0010787_CDS_0003 2 AcrIE1 0.64 View Alignment MGV-GENOME-0010787_CDS_0003 M L H K T -W N V R D ---Q -----------------T E E D L R L E A D K L Y R E I E A E Y K I I K K I -S (60)
M + + + A+ L + I++
AcrIE1 M E K -K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R -Q -
MGV-GENOME-0010787_CDS_0003 D K E ---E A H K I I D R I W -I M -K K -W -A N -D -I -Q -L E -L M R K E ---Y N N E -A (111)
E A + ID R +
AcrIE1 G L E E A E G A C R N I D I M R A -K W -V E -V C -G -E -V -N Q -H G I R V Y G D A I D R D V D
MGV-GENOME-0010787_CDS_0003 3 AcrIF23 0.61 View Alignment MGV-GENOME-0010787_CDS_0003 M L -H K -T W N V R D -------Q ----------------------------------------(60)
M D Q
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0010787_CDS_0003 ------------------------T E E D -L R L E A D K L Y R E -I E -A E Y K I I K K I S -D K E E A (120)
A A I + E+
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q -D Q A E M A C D P -S G L -L T A A K F W I E N R N D S A Q E I
MGV-GENOME-0010787_CDS_0003 H K I I D R I W I M K K W A N D ----I -Q -----L E L M R K E Y N N ---E -A (164)
+ + + +
AcrIF23 A G F V M Q Q K A L L A Q H R S A K A A -G -Q A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0010787_CDS_0003 4 AcrIIC4 0.59 View Alignment MGV-GENOME-0010787_CDS_0003 M L -H K -T W N V R D ------Q --------T E E D L R L E A D K L Y R E I -E A E Y K I I K K I -S D K E E (60)
M ++ E ++ + K KE
AcrIIC4 M K I T S S N F A T -I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q -F S S A R D F F K N E N Y S K E L
MGV-GENOME-0010787_CDS_0003 A H K I I -D R I W I -M -K -K -W A N -D I Q L E L M R K E Y N N ---E A (100)
A K + A + +
AcrIIC4 A E K F N K E ----A -V -N -E -A V E -K L Q K A I D L A E K Q G I Q -F
MGV-GENOME-0010787_CDS_0003 5 AcrIF25 0.58 View Alignment MGV-GENOME-0010787_CDS_0003 M L H K T W N V R -D -----Q -------------------------------------------(60)
M
AcrIF25 M D N D D -K K P D -A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A A
MGV-GENOME-0010787_CDS_0003 ------------------------------------------T -E -E D -L -R -L E -A -D K (120)
AcrIF25 A M A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A -A L -W -A -R E -G -Y Q -
MGV-GENOME-0010787_CDS_0003 -L -Y R E I E A -E Y K I I K K --I --S -D K E E A H K I I D R I W I M K K W A N D I Q L E L M R K E Y N N -E A (180)
+ ++ A + W+ Q EL
AcrIF25 L -L S S G L P D S Y S G A V P -N E -G R -T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G -G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;