3D Structure for MGV-GENOME-0010681_CDS_0010 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.32 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0010681_CDS_0010 1 AcrIE6 0.71 View Alignment MGV-GENOME-0010681_CDS_0010 M M N K T W N V R D Q T E E D L R V E A E R L Y K Q I E A G Y K M V K K V S K -L ----E D A E K L I E R I W V M K K (60)
M N + E L + ++ + + + + I
AcrIE6 M -N -------N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L -S P M Y T A V M V T Y D L I G K Q L A
MGV-GENOME-0010681_CDS_0010 W A -N -D -I -E -M E -L I R R E Y T Y -E T Q -T E D A G T H (94)
L
AcrIE6 S R R -A -E -L -I E -I L E E Q Y P G H A A D L S I K N -L C P
MGV-GENOME-0010681_CDS_0010 2 AcrIE1 0.63 View Alignment MGV-GENOME-0010681_CDS_0010 M M N K ---T W -N V R D -Q ------------------T E E D L R V E A E R L Y K Q I E A G Y K M V K K V (60)
M K + + AE L Q+ +++
AcrIE1 M E K K L S D A Q V -A L -V -A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q
MGV-GENOME-0010681_CDS_0010 S K L E D A E K L I E R I W V M K K W A N D I E M E L I R R E Y T Y -E T Q T E D A G T H (105)
LE+AE + I +M+ ++ E+ + +
AcrIE1 -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D -V D
MGV-GENOME-0010681_CDS_0010 3 AcrIF23 0.57 View Alignment MGV-GENOME-0010681_CDS_0010 M M -N K T W N -V ---R -D --Q -----------------------------------------(60)
M TW
AcrIF23 M T N F Q T W L D S A D I P V Q Q N -G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0010681_CDS_0010 ------------------------T -E E -D L R -V -E A -E R -L Y K Q -I E -A G Y K M V K K V S K (120)
+ A +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N -Q -D Q A -E -M A C -D -P S G L -L T A A K F W I E N -R -
MGV-GENOME-0010681_CDS_0010 L E D A E K L I E R I W V M K K W A N -D I E -M E -L I R -R -E ----Y T Y E T Q T E -D A -G ---T H (176)
+ A ++ + K + + +
AcrIF23 N D S A Q E I A G F V M -Q Q K A L L A -Q H R S -A K A -A -G Q A D K V A K I A A E Y N A -L T A R W G -F
MGV-GENOME-0010681_CDS_0010 4 AcrIIC4 0.56 View Alignment MGV-GENOME-0010681_CDS_0010 M M -N K T W N V R D ----Q -----------T E E D L R V E A E R L Y K Q I E A G Y K M V K K V -S K L E D A (60)
M + + + E ++ + Q K E A
AcrIIC4 M K I T S S N F A T I A T S E -N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A
MGV-GENOME-0010681_CDS_0010 E K L I -E R I W V -M -K K -W A N -D I E M E L I R R E Y T Y E T Q -T -E -D -A G T H (107)
EK E A +I +
AcrIIC4 E K F N K E ----A -V N -E -A V E -K L Q K A I D L -------A -E -K -Q G I Q F
MGV-GENOME-0010681_CDS_0010 5 AcrIC3 0.54 View Alignment MGV-GENOME-0010681_CDS_0010 M M N K T W N V R D ------Q ---------------T E E D L R ---V ---E -A -E -R -L Y K Q I E A (60)
M + + + IE+
AcrIC3 M S I Q V T S T N G R T V N L E -I E L G S V V A S S G Q V K F M A D K T D R G L E S R F L V -P -E -A G N R R I E V
MGV-GENOME-0010681_CDS_0010 G Y K M V K -K -V S K L -E D A E K L I E R I W V M K K W A N D I E M E L I R R E -Y T Y -E T Q T E D A G T H (117)
L A L + + + + +
AcrIC3 A L ----T -G -R D L E -A A N A L F S E L A A S V ---E A T N E M Y R E -L D A E -R A Q I N K A L E -G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;