3D Structure for MGV-GENOME-0010635_CDS_0008 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.88 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0010635_CDS_0008 1 AcrIE6 0.71 View Alignment MGV-GENOME-0010635_CDS_0008 M E N K P W N V R D Q T D E N L M Q E L T K T Y K A I D A A Y K M V R Q A ---T -N I E D A K Y Y I D I A F R K K A S (60)
M N + L Q + ++D + + ++ + + D++ + AS
AcrIE6 M N N -D ---T E V ----L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S
MGV-GENOME-0010635_CDS_0008 A S N I E -V E -I L R R E ----I N H -G -K --E E (89)
L + K
AcrIE6 R R A E L I E -I -L E E Q Y P G H A A D L S I K N L C P
MGV-GENOME-0010635_CDS_0008 2 AcrIE1 0.63 View Alignment MGV-GENOME-0010635_CDS_0008 M E -N K --P -W N V R D Q ----------T D ----E -N -L -M ----Q E L T K T Y K A I D A A Y K M V R (60)
ME + + + + + +R
AcrIE1 M E K K L S D A Q V A L -V A A W R K Y P D L R E S L E E A A -S -I -L -S L I V F Q A E T L S D Q A N E L A N Y I R
MGV-GENOME-0010635_CDS_0008 Q -A T ---N I E D A K Y Y I D I A F -R K K A S A S -N I E V E I L R R E I N H G --K -E -E (110)
+ +E A IDI K + + + +R + +
AcrIE1 -R -Q G L E E A E G A C R N I D I M R A -K W V E V C G E V N Q H G I R -V Y G D A I D R D -V D
MGV-GENOME-0010635_CDS_0008 3 AcrIIC4 0.59 View Alignment MGV-GENOME-0010635_CDS_0008 M E N -K -P -W N -V --------R -D -Q ----T -D E N L M Q E L T K T Y K A I D A A Y K M V R Q A -T N I (60)
M + + E + A ++ +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L -S -V -L P K N -H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K
MGV-GENOME-0010635_CDS_0008 E D A K Y Y I D -I A F R K K A -S A S -N I E V E I L R R E I N H G K E E (98)
E A ++ A ++ G
AcrIIC4 E L A E K F N K E A V N ----E -A V E -K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0010635_CDS_0008 4 AcrIF25 0.56 View Alignment MGV-GENOME-0010635_CDS_0008 M E N -K --P W N -V ----R -D -Q -----------------------T ----D -E N L -M ----(60)
M+N P + +
AcrIF25 M D N D D K K P D A L I H L R V -P -A -E V K G R W V K E S R L E G M K L T D W I T G R V E A K -A L S -I -A E V L
MGV-GENOME-0010635_CDS_0008 ----Q E -L -T -K -T -Y ----------------K A I D A A Y K M V R Q A ---T N I E D A K Y Y I D I (120)
I A + DA +
AcrIF25 E E A A A -M -A -R -S -L -E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E
MGV-GENOME-0010635_CDS_0008 ------------------------------A F R K K A S A S N I E V E I L R R E I N H G K -E -E (178)
R GK +
AcrIF25 G Y Q L L S S G L P D S Y S G A V P N E G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
MGV-GENOME-0010635_CDS_0008 5 AcrIF23 0.55 View Alignment MGV-GENOME-0010635_CDS_0008 M E -N K P W N ----V -R ---D -Q ---------------------------------------(60)
M W +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0010635_CDS_0008 ----------------T ----D E N L -M ----Q E L T K T Y K A -I -D A A Y K M V R Q A T N I E D A K (120)
+ E AA + + + A
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q -M -N Q D Q A E M A C D P S G L -L T A A K F W I E N R --N D S A Q
MGV-GENOME-0010635_CDS_0008 Y Y I D -I A F R K K A S A S N I E V E I L -R R E -----------I -N H G K -E --E (168)
I + +
AcrIF23 E -I A G -F V M Q Q K A L L A Q H R S A K A -A G Q A D K V A K I A A E Y N A -L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;