3D Structure for MGV-GENOME-0010511_CDS_0005 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.60 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0010511_CDS_0005 1 AcrIE6 0.74 View Alignment MGV-GENOME-0010511_CDS_0005 M M H K T W N V R D E T K E A L E E L L A R K Y K E I D G N Y K M L R K -V -S ---N I E D A K R L -V D E -I W Q M (60)
M E+LE + +D L + D
AcrIE6 M -N N D -------T E V L E Q Q I K A F E L L A D E L K D R L P T L -E I L S P M Y T A V M V T Y -D L I G K -Q
MGV-GENOME-0010511_CDS_0005 -K N F T N A I E L E L -M R R -E ----Y T N --G --T -A S (94)
+ + +
AcrIE6 L A S R R A E L I E I -L E E -Q -Y P G H A A D L S -I K N L C P
MGV-GENOME-0010511_CDS_0005 2 AcrIE1 0.63 View Alignment MGV-GENOME-0010511_CDS_0005 M M H K ---T W N V R D ---E -----------T K -E -A -L -E ----E L L A R K Y K E I D G N Y K M L R (60)
M +K + + + +R
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A -A -S -I -L -S L I V F Q A E T L S D Q A N E L A N Y I R
MGV-GENOME-0010511_CDS_0005 K -V -S N I E D A K R L V D E I W Q M K N F T N A I E L E L M R R E ----Y -T -N -G -T A S (110)
+E+A + I M+ + E+ + +
AcrIE1 -R -Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I -D -R D V D
MGV-GENOME-0010511_CDS_0005 3 AcrIIC4 0.62 View Alignment MGV-GENOME-0010511_CDS_0005 M M -H K -T W N V ----------R D -E ----T K E A L E E L L A R K Y K E I D G N Y K M L R K -V S N I E D (60)
M + + +E + L + + E
AcrIIC4 M K I T S S N -F A T I A T S E N F A K L S V -L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L
MGV-GENOME-0010511_CDS_0005 A K R L -V D E I W Q M -K N F -T -N A I -E -L -E L M R R E Y T N G T A S (100)
A + + + +G
AcrIIC4 A E K F N K E ---A -V N E -A -V E K -L -Q -K -A I D L A E K Q G I Q F
MGV-GENOME-0010511_CDS_0005 4 AcrIF23 0.57 View Alignment MGV-GENOME-0010511_CDS_0005 M M -H K T W -N ---V -R -D -------------------------------------------(60)
M TW +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0010511_CDS_0005 E -------------------T K E A L E ---E -L L A R -K Y K E -I D G -N Y K M L R K V S N I E D A K (120)
A + + + A
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E -M A C D -P S G L L T -A A K F W I E N -R -N D S A Q
MGV-GENOME-0010511_CDS_0005 R L V D E I W Q M K N F T N A I E -L E L -M R R -E -----------Y T N G T --A -S (168)
++ + Q K T
AcrIF23 E I A G F V M Q Q K A L L A Q -H R S A -K A -A G Q A D K V A K I A A E Y N A -L T A R W G F
MGV-GENOME-0010511_CDS_0005 5 AcrIF25 0.54 View Alignment MGV-GENOME-0010511_CDS_0005 M M H K T W ----N --V -R D -----------E ---------------------T K E A L E ----(60)
M E + +
AcrIF25 M D N D D K K P D A -L I -H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A A
MGV-GENOME-0010511_CDS_0005 E -L -L -A ---R K ------------Y K E I D G N Y K M L R K V S N I E D A K R L V D E -I W Q M K N F T N (120)
I + + D +D + + +
AcrIF25 -A -M -A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A ---T D D A T R L D -A A L W A R E G Y Q
MGV-GENOME-0010511_CDS_0005 A I E L E L ----M R R E ---------------------------------Y T N G T --A S (176)
++ L G
AcrIF25 L L S S G L P D S Y S G A -V P N E G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;