3D Structure for MGV-GENOME-0010407_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.98 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0010407_CDS_0002 1 AcrIE6 0.73 View Alignment MGV-GENOME-0010407_CDS_0002 M M H K T W N V R D Q T K E A L E I L L E R K Y K E I D G N Y K M L R K V -S ---N I E D A K K L V E E I -W Q M -K (60)
M E+LE + +D L + + + I
AcrIE6 M -N N D -------T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K -Q L A
MGV-GENOME-0010407_CDS_0002 S F A N A I E M E L I R R -E -----C N N G --T T -S (90)
S + L +
AcrIE6 S R R A E L I E I L E E -Q -Y P G H A A D L S I K N L C P
MGV-GENOME-0010407_CDS_0002 2 AcrIE1 0.62 View Alignment MGV-GENOME-0010407_CDS_0002 M M H K ---T W -N V R D Q ----------T K ----E -A -L -E -I -L L -E ----R K Y K E I D G N Y K (60)
M +K + + + +
AcrIE1 M E K K L S D A Q V -A L V A A W R K Y P D L R E S L E E A A -S -I -L -S -L I -V -F Q A E T L S D Q A N E L A N
MGV-GENOME-0010407_CDS_0002 M L R K -V -S N I E D A K K L V E E I W Q M K S F A N A I E M E L I R R E ----C N N -G --T T S (112)
+R +E+A + I M+ + E+ +
AcrIE1 Y I R -R -Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I -D R D V D
MGV-GENOME-0010407_CDS_0002 3 AcrIIC4 0.61 View Alignment MGV-GENOME-0010407_CDS_0002 M M -H K T W N V R D -----------Q ----T K E A L E I L L E R K Y K E I D G N Y K M L R K V -S N I E D A (60)
M + + +E + L + + E A
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V -L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A
MGV-GENOME-0010407_CDS_0002 K K L -V E E I W Q M -K S F -A N A I E -M E L I R R E C N N G T T S (96)
K E + +I +G +
AcrIIC4 E K F N K E ---A -V N E -A V E K -L Q K -A I D L A E K Q G I Q F
MGV-GENOME-0010407_CDS_0002 4 AcrIF23 0.56 View Alignment MGV-GENOME-0010407_CDS_0002 M M -H K -T W ---N V -R D ---------------------------------Q ----------(60)
M +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0010407_CDS_0002 --------------------T K E A L E ---I -L -L E R -K Y K E -I D G -N Y K M L R K V S -N I E D (120)
+ + + + ++ +
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E -M -A C D -P S G L L T -A A K F W I E N R N D S A Q E
MGV-GENOME-0010407_CDS_0002 A K K L V E E I W Q M K S F A N A I E ----M E -L -I -R -R -E ----C N N G T T --S (168)
+ V + +
AcrIF23 I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K -V -A -K -I -A A E Y N A L T A R W G F
MGV-GENOME-0010407_CDS_0002 5 AcrIF25 0.55 View Alignment MGV-GENOME-0010407_CDS_0002 M M H K T W ----N -V R -D --------Q -------------------------T -K E A L E I L L (60)
M ++ + + +
AcrIF25 M D N D D K K P D A -L I H L -R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I -A E V L E E A
MGV-GENOME-0010407_CDS_0002 E ---------------R ----K -Y K E I D G N Y K M L R K V S N I E D A K K L V E E I W Q M K S F A N -A (120)
+ I + ++ ++ + + ++
AcrIF25 A A M A R S L E D S P I F Y R N K L C A D -G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S S -
MGV-GENOME-0010407_CDS_0002 I E -M E -L -----I R R -E ----------------------------C N N G T -T -S (174)
G
AcrIF25 G L P D -S -Y S G A V P -N E G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;