3D Structure for MGV-GENOME-0010247_CDS_0008 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.83 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0010247_CDS_0008 1 AcrIE6 0.72 View Alignment MGV-GENOME-0010247_CDS_0008 V L H K T W Q V R D Q T E K N L R I E A D R L Y K E I E A G Y K M L K K I S ----N I E D A K K I V D R I W I M K A W (60)
+ L + ++ L + + D I A
AcrIE6 M -------N -N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S
MGV-GENOME-0010247_CDS_0008 -A N -D -I Q L -E L M R R E Y ---T N -E -A Q -T A D A W T H (95)
+ + Y + +
AcrIE6 R R -A -E -L I E -I L E E Q Y P G H A -A -D L -S I K N L -C P
MGV-GENOME-0010247_CDS_0008 2 AcrIE1 0.63 View Alignment MGV-GENOME-0010247_CDS_0008 V L ---H K T W Q V R D Q -----------------T E K N L R I E A D R L Y K E I E A G Y K M L K K I S N I (60)
+ + A+ L + +++ +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q -G L
MGV-GENOME-0010247_CDS_0008 E D A K K I V D R I W I M K A W A N D I Q L E L M R R E Y T -N E A Q T A D A W T H (102)
E+A + I IM+A ++ E+ +
AcrIE1 E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R -D V D
MGV-GENOME-0010247_CDS_0008 3 AcrIIC4 0.58 View Alignment MGV-GENOME-0010247_CDS_0008 V L --H K T W Q -V ------------R D -Q -T E K N L R I E A D R L Y K E I E A G Y K M L K K I -S N I E D (60)
++ + ++ + K
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P -K -N H R E P I K G L F K S A V E Q F S S A R D F F K N E N ---Y -
MGV-GENOME-0010247_CDS_0008 A K K I V -D R I W I M K A W A N D I Q L E L M R R E Y T N E A Q T A -D A W T -H (102)
K ++ K +N++ L + A
AcrIIC4 S K E L A E K -F --N K E A V N E A V E K L Q K A I D L -----A E K Q G I Q F
MGV-GENOME-0010247_CDS_0008 4 AcrIF23 0.57 View Alignment MGV-GENOME-0010247_CDS_0008 V L -H K -T W Q V ----R D ----Q ---------------------------------------(60)
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0010247_CDS_0008 -----------------------T E K -N L R I E A -D -R L Y K E -I E A -G Y K M L K K I S N I E D A (120)
+ +E + + A
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q -D Q A E M A -C D -P S G L -L T A A K F W I E N R --N D S A
MGV-GENOME-0010247_CDS_0008 K K I V D R I W I M K A W A N -D I Q -L E L -M R R -E ----Y T N E A -Q T A -D A ---W -T H (172)
I+ + + + +
AcrIF23 Q E I A G F V M -Q Q K A L L A -Q H R S -A K A -A G Q A D K V A K I A -A E Y -N A L T A R -W G F
MGV-GENOME-0010247_CDS_0008 5 AcrIF25 0.54 View Alignment MGV-GENOME-0010247_CDS_0008 V L H K T W Q V R D ----Q ---------------------------------T E K N ----L R -I (60)
+ +
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A -A -
MGV-GENOME-0010247_CDS_0008 ----E -A ----D --------R L Y K E I E A G Y K M L K K I S N I E D A K K I V D R -I W I M K A W A N D I (120)
I ++ D +D + + + +
AcrIF25 A M A R S L -E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T ---D D A T R L D -A A L W A R E G Y Q L L
MGV-GENOME-0010247_CDS_0008 Q L E L ---M -R -R -------E -----------Y -T N E A -------Q -T A --D -A -W -T H (178)
+ L EA Q +
AcrIF25 S S G L P D S Y S -G A V P N E G R T G W V T A S Q M A R L F -G -G E A L W I E R C Q Q E L G G A -G -K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;