3D Structure for MGV-GENOME-0009889_CDS_0008 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.68 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0009889_CDS_0008 1 AcrIE6 0.59 View Alignment MGV-GENOME-0009889_CDS_0008 M K C W N V R D Q T D T T L T T T L A R T Y K E I E A A Y K Q V R Q A A ----T I ----E D A K F Y L D M A F R K K (60)
M L +++ ++ + + ++ + ++
AcrIE6 M -N N -D ----T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R
MGV-GENOME-0009889_CDS_0008 A F A N D I E M E Q I R R R I N N -G -E --E E (85)
A + +I EQ ++
AcrIE6 A E L I E I L E E Q Y P G H A A D L S I K N L C P
MGV-GENOME-0009889_CDS_0008 2 AcrIF23 0.54 View Alignment MGV-GENOME-0009889_CDS_0008 M K C -W N V R D Q ------T -D T -T -------L T -----------T -----------------(60)
M + D+ + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0009889_CDS_0008 -T L -----------------------------A R T Y K E I E A -A Y K -Q V R Q -A A T I ---E D (120)
+ A + K + + ++
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A -A K F W I E N R N D S A Q E I A G
MGV-GENOME-0009889_CDS_0008 A K F Y L D M A F R K K A F A -N -D -I E ----M E Q I R R R I N N G E --E -E (163)
+ + A I N
AcrIF23 F V M Q Q K A L L A Q H R S A K -A -A G -Q A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0009889_CDS_0008 3 AcrIE1 0.54 View Alignment MGV-GENOME-0009889_CDS_0008 M K -C -W N V R D ------Q -------T D T ----T -L -T -T -T -L ----A R T Y K E I E A A Y K Q V (60)
M + + + + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S -I -L -S -L -I -V F Q A E T L S D Q A N E L A N Y I
MGV-GENOME-0009889_CDS_0008 R Q -A A T ---I E D A K F Y L D M A -F -R K K A F A N -D I E M E Q I R R R I N N G --E -E E (111)
R +E A +D + ++ R +
AcrIE1 R -R -Q G L E E A E G A C R N I D I M R -A K W V E V C -G E V N Q -H G I R V Y G D A I D R D V D
MGV-GENOME-0009889_CDS_0008 4 AcrIC3 0.51 View Alignment MGV-GENOME-0009889_CDS_0008 M K C W N V --R -D --Q -----T D T -T L -T -----T ----T L A R -T ---Y -K -E I E A A Y K Q V R (60)
M + R EA + +
AcrIC3 M S I Q V T S T -N -G R T V N L E I E L G S V -V A S S G Q V K F M A D K T D R G -L E S R F -L V P E A G N R R I E
MGV-GENOME-0009889_CDS_0008 Q A ---A T I E D A K F Y L D M A F R K K A F ----A N -D -I E M E Q I R R -R I N N G E E E (110)
A +E A + IN E
AcrIC3 V A L T G R D L E A A N A L F S E L A A S V E A T N E M Y -R -E -L D A E R A -Q -I N K A L E G
MGV-GENOME-0009889_CDS_0008 5 AcrIF3 0.51 View Alignment MGV-GENOME-0009889_CDS_0008 M K -C -W N -V R D Q T D T T -----L T ----------------T T L -----A R T ----Y K E I E A (60)
M + + AR +
AcrIF3 M S S T I S D R I I S R S V I -E A A R F -I Q S W E D A D P D N L T E S Q V L A -A S S F A A R L H E G L Q A T V L Q
MGV-GENOME-0009889_CDS_0008 A Y K Q V R Q A ---A -------------------------T I E -D -A K F Y L D M A F -----R K K (120)
+ A L A
AcrIF3 R L V D E S N R D E Y R E F Q A W E E A L L N A D G R V T S N P F A D W G W W Y R -I A N V M L A T A S Q N V G V A W G
MGV-GENOME-0009889_CDS_0008 A F A N D I E M E Q I R R R I N N G -E E --E (144)
+ M R ++ E+
AcrIF3 S H V H G R L M A I F Q D R F Q Q H Y E D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;