3D Structure for MGV-GENOME-0009258_CDS_0008 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.02 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0009258_CDS_0008 1 AcrIIA27 0.76 View Alignment MGV-GENOME-0009258_CDS_0008 M T L K K Y R V Y V W -N K --V ----N W -S N D Y Y E I N A I D P V D A R N M A V Q R L I E E T G H --G L D E -(60)
M + V + N Y + A +A A + +
AcrIIA27 M -K -T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R D L
MGV-GENOME-0009258_CDS_0008 W E I -T -------E ---V K H -I K E D (84)
+ E
AcrIIA27 T A -I D N T H R R A W -G R R Y L -R V E E A
MGV-GENOME-0009258_CDS_0008 2 AcrIE2 0.70 View Alignment MGV-GENOME-0009258_CDS_0008 M T L K K Y R V Y V W N K V --N W S N D Y Y -E I N -A -I -D P V D A R N M A V Q R L I E E T G H ----G L ---(60)
M Y + N + + A++ A Q L EE
AcrIE2 M -N -T Y L I D P R K -N N D N S G E R F -T -V D A -V -D I T A A A K S A A Q Q I L G E E F E G L V Y R E T G E S
MGV-GENOME-0009258_CDS_0008 -D E W -E -I ---T -E V ----K ---H I --------K E D (96)
E
AcrIE2 N -G S G -M -F Q A Y H H -L H G T N R T E T -T V G Y P F H V M E L
MGV-GENOME-0009258_CDS_0008 3 AcrIC9 0.64 View Alignment MGV-GENOME-0009258_CDS_0008 M T --L -K -K -Y R V Y V W N K V N W S N D Y Y E I N A I D P V D A R N M A V Q R L I E E T G H G L D -E W E I T E (60)
M Y++ N + Y +D+ V L + +
AcrIC9 M E T K M T -S -F Y K I T -A -Y -N S Q A L Y F W ---G T D A D V D -R Y V D W L N R D R E I ---N V Y A A E A
MGV-GENOME-0009258_CDS_0008 V K H --I ----------------K -------E D (92)
+ E
AcrIC9 I P E A E -W A Q Y E G R D D V L S G E E C G W D D F M S A E A
MGV-GENOME-0009258_CDS_0008 4 AcrIF5 0.57 View Alignment MGV-GENOME-0009258_CDS_0008 M T L K K Y R V Y V W N K V N W -S -N ---------D Y Y E -I N A I D P V D A R N M A V Q R L I E E T ---G H (60)
M+ + N S DP A A Q + E
AcrIF5 M S R P T V V T V T E T P R N P G S Y E V N V E R D G K M V V G R A R A G S D P G A A A A K A M Q M A M E W G S P N Y V
MGV-GENOME-0009258_CDS_0008 G -L -D E W E I T -E V -K H I --K -E D (83)
+
AcrIF5 I L -G -S N K V L A F -I P E Q L R V K -M
MGV-GENOME-0009258_CDS_0008 5 AcrIE8 0.56 View Alignment MGV-GENOME-0009258_CDS_0008 M T L K K Y R V Y V W N K V N W S N D Y Y E I N A I D P V D A R N M -A V Q R L I E E T G H G L D E -W E I ------(60)
M + +A+ + E
AcrIE8 M -T -T I T I N -T Y ---D P E A R ---F N M S G E E A K E -F -F A F V E E Q A K V S G -F D V Y Y D S C T Y V
MGV-GENOME-0009258_CDS_0008 T --E V ----K H -I K E D (76)
E +
AcrIE8 -D E E S E R F V E K C F Q N Y
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;