3D Structure for MGV-GENOME-0009258_CDS_0005 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.21 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0009258_CDS_0005 1 AcrIE6 0.74 View Alignment MGV-GENOME-0009258_CDS_0005 M M N K T W N V R D -Q P K E A I E E L L E R K Y K E I D G N Y K M L R K V S ----N I E D A K R L -I D E I -W -Q (60)
M + +E + +D L + + D I
AcrIE6 M N -N D ---T E V -----L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y -D L I G -K -
MGV-GENOME-0009258_CDS_0005 M -K S F -A N A I E L E L M R R E -----Y N N --G --T -T S (95)
S + L +
AcrIE6 Q L A S -R R A E L I E I L E E Q -Y P G H A A -D L S -I K N L C P
MGV-GENOME-0009258_CDS_0005 2 AcrIE1 0.63 View Alignment MGV-GENOME-0009258_CDS_0005 M M N K T ---W -N V R D ----Q -------P K ----E -A -I -E -E -L -L -E ----R K Y K E I D G N (60)
M K + +
AcrIE1 M E K K L S D A Q V -A L V A A W R -K Y P D L R E S L E E A A -S -I -L -S -L -I -V -F Q A E T L S D Q A N E L
MGV-GENOME-0009258_CDS_0005 Y K M L R K -V -S N I E D A K R L I D E I W Q M K S F A N A I E L E L M R R E ----Y N N ---G T T S (114)
+R +E+A + I M+ + E+ +
AcrIE1 A N Y I R -R -Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D -A I D R D V D
MGV-GENOME-0009258_CDS_0005 3 AcrIIC4 0.62 View Alignment MGV-GENOME-0009258_CDS_0005 M M -N K T W N V R D -----------Q ----P K E A I E E L L E R K Y K E I D G N Y K M L R K V -S N I E D A (60)
M + + + +E I L + + E A
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V -L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A
MGV-GENOME-0009258_CDS_0005 K R L -I D E I W Q M -K S F -A N A I E L -E L M R R E Y N N G T T S (96)
+ + + + +G +
AcrIIC4 E K F N K E ---A -V N E -A V E K -L Q K -A I D L A E K Q G I Q F
MGV-GENOME-0009258_CDS_0005 4 AcrIF23 0.57 View Alignment MGV-GENOME-0009258_CDS_0005 M M N -K -T W ----N -V R -D ------------------------------------------(60)
M N
AcrIF23 M T N F Q T W L D S A D -I P -V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
MGV-GENOME-0009258_CDS_0005 Q ---------------------P K E A I E ---E -L L E R -K Y K E -I D G -N Y K M L R K V S N I E D (120)
+ + +
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E -M A C D -P S G L L T -A A K F W I E -N R -N D S
MGV-GENOME-0009258_CDS_0005 A K R L I D E I W Q M K S F A N A I E -L E L M R R -E -----------Y N N G T T --S (168)
A ++ + Q K +
AcrIF23 A Q E I A G F V M Q Q K A L L A Q -H R S A K A A -G Q A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0009258_CDS_0005 5 AcrIF25 0.56 View Alignment MGV-GENOME-0009258_CDS_0005 M M N K -T --W -N V R -D -------Q ----------------------P K E A ---I E E L L E R -(60)
M N ++ + E +
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A A A M
MGV-GENOME-0009258_CDS_0005 ------K ------------Y K E I D G N Y K M L R K V S N I E D A K R L I D E I W Q M K S F A N -A I E -L (120)
I + ++ ++ + + ++
AcrIF25 A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S S -G L P D
MGV-GENOME-0009258_CDS_0005 E -L -M R R -E ---------------------------------Y N N G T -T -S (171)
G
AcrIF25 -S -Y S G -A -V P N E G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;