3D Structure for MGV-GENOME-0009098_CDS_0003 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.95 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0009098_CDS_0003 1 AcrIE6 0.73 View Alignment MGV-GENOME-0009098_CDS_0003 M M N K T W N V R D Q -P R E S L E R Q L Q K K Y K E I D G N Y K M L R K V S ----N I E D A K M -L -V D E I W -Q (60)
M E LE Q+ +D L + + D I
AcrIE6 M N -N -------D -T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T -Y -D L I G K -
MGV-GENOME-0009098_CDS_0003 M -K S F -A S T I E -L E L M R R -E -----Y N N --G --T -T S (97)
S + L +
AcrIE6 Q L A S -R R A E L -I E I L E E -Q -Y P G H A A -D L S -I K N L C P
MGV-GENOME-0009098_CDS_0003 2 AcrIIC4 0.62 View Alignment MGV-GENOME-0009098_CDS_0003 M M -N K T W N -----V -----R -D -Q ----P R E S L E R Q L Q K K Y K E I D G N Y K M L R K V -S N I E D (60)
M + + RE + + + E
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S -V -L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L
MGV-GENOME-0009098_CDS_0003 A K M L -V D E I W Q M -K S F -A S -T -I E L E L M R R E Y N N G T T S (98)
A + + +G +
AcrIIC4 A E K F N K E ---A -V N E -A -V E -K -L Q K A I D L A E K Q G I Q F
MGV-GENOME-0009098_CDS_0003 3 AcrIE1 0.61 View Alignment MGV-GENOME-0009098_CDS_0003 M M N K T ---W N V R D -Q ----------P R ----E -S -L -E ----R Q L Q K K Y K E I D G N Y K M L R (60)
M K + Q+ + +R
AcrIE1 M E K K L S D A Q V A L -V A A W R K Y P D L R E S L E E A A -S -I -L -S L I V F Q A E T L S D Q A N E L A N Y I R
MGV-GENOME-0009098_CDS_0003 K -V -S N I E D A K M L V D E I W Q M K S F A S T I E L E L M R R E ----Y N N ---G -T T S (110)
+E+A + I M+ + E+ +
AcrIE1 -R -Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D -A I D -R D V D
MGV-GENOME-0009098_CDS_0003 4 AcrIF23 0.57 View Alignment MGV-GENOME-0009098_CDS_0003 M M N -K -T W N ---V -R -D ----------Q --------------------------------(60)
M N +
AcrIF23 M T N F Q T W L D S A D I P -V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0009098_CDS_0003 ---------------------P R E S L E ----R Q L Q K K Y K E -I D G -N Y K M L R K V S -N I E D A (120)
+ + + + ++ ++
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M -N Q D Q A E M A C D P S G L L -T A A K F W I E N R N D S A Q E I
MGV-GENOME-0009098_CDS_0003 K M L V D E I W Q M K S F A S T I E L E L -M R R E --------Y N N G T -T --S (164)
V ++ + +
AcrIF23 A G F V M Q Q K A L L A Q H R S A K A A G Q A D K -V A K I A A E Y N A L T -A R W G F
MGV-GENOME-0009098_CDS_0003 5 AcrIF25 0.56 View Alignment MGV-GENOME-0009098_CDS_0003 M M N K T W ---N -V R -D Q --------------------------------P R E S L E ----R -(60)
M N ++ +
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A A -A
MGV-GENOME-0009098_CDS_0003 Q -L -Q -K -----------K ----Y K E I D G N Y K M L R K V S N I E D A K M L V D E -I W Q M K S F A S T (120)
I + ++ D +D + + +
AcrIF25 -M -A -R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T ---D D A T R L D -A A L W A R E G Y Q L
MGV-GENOME-0009098_CDS_0003 I E L E L ----M R R E ---------------------------------Y N N G T -T -S (175)
+ L G
AcrIF25 L S S G L P D S Y S G A -V P N E G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;