3D Structure for MGV-GENOME-0006391_CDS_0008 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.93 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0006391_CDS_0008 1 AcrIE6 0.73 View Alignment MGV-GENOME-0006391_CDS_0008 M L H K S W N V R D Q T K E A L E E L L R R K Y K E I D G N Y K M L K K I ----S D I N D A K K L L D E I W Q I K -S (60)
M + E+LE ++ +D L + + + D I S
AcrIE6 M -N -------N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S
MGV-GENOME-0006391_CDS_0008 F -A N A I E -L E L -I R -R E ----Y S D G ---T -T S (92)
+ D +
AcrIE6 -R R A E L -I E I -L E -E -Q Y P G H A A D L S I K N L C P
MGV-GENOME-0006391_CDS_0008 2 AcrIIC4 0.62 View Alignment MGV-GENOME-0006391_CDS_0008 M L -H K S W N V R D -----------Q ----T K E A L E E L L R R K Y K E I D G N Y K M L K K -I S D I N D A (60)
M S + +E + L + K A
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V -L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A
MGV-GENOME-0006391_CDS_0008 K K L -L D E I W Q I -K S F -A N -A I E L E L I R R E Y S D G T T S (96)
K + +I G +
AcrIIC4 E K F N K E ---A -V N E -A -V E K -L Q K A I D L A E K Q G I Q F
MGV-GENOME-0006391_CDS_0008 3 AcrIE1 0.61 View Alignment MGV-GENOME-0006391_CDS_0008 M L H K S ---W N V R D --Q ---------T K ----E -A -L -E -E ----L L R R K Y K E I D G N Y K M L (60)
M +K + + + + +
AcrIE1 M E K K L S D A Q V A L -V A A W R K Y P D L R E S L E E A A -S -I -L -S -L I V F Q A E T L S D Q A N E L A N Y I
MGV-GENOME-0006391_CDS_0008 K K -I -S D I N D A K K L L D E I W Q I K S F A N A I E L E L I R R E ----Y S D ---G -T T S (111)
+ + +A + I + + E+ +
AcrIE1 R -R -Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D -A I D -R D V D
MGV-GENOME-0006391_CDS_0008 4 AcrIF23 0.56 View Alignment MGV-GENOME-0006391_CDS_0008 M L -H K S W N -V ---R -D ---------------------------------------Q ----(60)
M +W
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0006391_CDS_0008 ------------------------T K E A -L E -E -L L R -R -K Y K -E I D G N Y K M L K K I S D I N (120)
+ +
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q -D -Q A -E -M A C -D -P S G L L T A A K F W I E N R --N D
MGV-GENOME-0006391_CDS_0008 D A K K L L D E I W Q I -K S F A N A I E L -E L I R -R E ------------Y S D G T -T --S (172)
A ++ + Q K + +
AcrIF23 S A Q E I A G F V M Q -Q K A L L A -Q H R S -A K -A A G Q A D K V A K I A A E Y N A L T -A R W G F
MGV-GENOME-0006391_CDS_0008 5 AcrIF25 0.54 View Alignment MGV-GENOME-0006391_CDS_0008 M L H K S W N V R -D ------------Q ------------------------T K E A L E ----E -(60)
M + +
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A A -A
MGV-GENOME-0006391_CDS_0008 L L ----R ----R -----K ---Y K E I D G N Y K M L K K I S D I N D A K K L L D E -I W Q I K S F A N A I E (120)
I + ++D L + + ++ +++
AcrIF25 M -A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D ---D A T R L -D A A L W A R E G Y Q L L S
MGV-GENOME-0006391_CDS_0008 L E L I R ---R E ----------------------------------Y S D G T -T -S (173)
L G
AcrIF25 S G L P D S Y S G -A V P N E G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;