3D Structure for MGV-GENOME-0003624_CDS_0005 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 90.66 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0003624_CDS_0005 1 AcrIE1 0.84 View Alignment MGV-GENOME-0003624_CDS_0005 M I Q H --K -T W N V ---R D -Q -----------T E -D -E -L -K -S -I L -E K -K Y K -K I D ----(60)
M + + + I +
AcrIE1 M E K K L S D A Q V A L V A A W -R -K Y P D L R E S L E E A -A -S -I -L -S -L I -V F -Q -A E T -L S D Q A N
MGV-GENOME-0003624_CDS_0005 A -Q F K L L -R K -I A D I E T A K K M L E E I W D L K S F A N A V E L E L I R R G ----F -Y N --G -T S (117)
R +E A I + V E+ +G
AcrIE1 -E L A N Y -I R -R -Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A -I D R D V D
MGV-GENOME-0003624_CDS_0005 2 AcrIE6 0.81 View Alignment MGV-GENOME-0003624_CDS_0005 M I Q H K T W N V R D Q T E D -E L K S I L E K K Y K K I D A Q F K L L R K I -A ---D I E T A K K M L E E I W D L K (60)
M + + L + + +D L + + + + I
AcrIE6 M -N N ---D -----T E V -L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L
MGV-GENOME-0003624_CDS_0005 -S F -A N A V E L E L I R R G ----F --Y N -G --T S (91)
S + L
AcrIE6 A S -R R A E L I E I L E E Q Y P G H A A D L S -I K N L C P
MGV-GENOME-0003624_CDS_0005 3 AcrIIA34 0.81 View Alignment MGV-GENOME-0003624_CDS_0005 M I Q H --K T W N V ------R D ----Q ------------------T E -D -E -L -K -S ------(60)
M + ++
AcrIIA34 M K N I A N E I K T I R Y A F E D G R S T Q K -S I M R K I K A L T D Q F E T M D D L -I -D -S -L -N -S Y A D T H
MGV-GENOME-0003624_CDS_0005 --I -L E -K -K -Y K -K -I D A -Q -F K L L R K I A D I E T A ---K K -M L ----E E ----I -W D L K S (120)
+ T E ++
AcrIIA34 Y T -W -A I -T -Y F -Q -L A R -I -I -I S F Q A S N -N T T S E K K I D L -Q S G P I E -V N G K -L -K I R V
MGV-GENOME-0003624_CDS_0005 F A N A V E -L -E L I R R G -----F ---Y -N G T S (150)
+ +L+
AcrIIA34 T V D E F -M -A D L A N W E H L E D I K K L A -K E L -A
MGV-GENOME-0003624_CDS_0005 4 AcrIIA19 0.79 View Alignment MGV-GENOME-0003624_CDS_0005 M I Q H K T W -N -------V R D --------Q -------------------------------T (60)
M +
AcrIIA19 M -K L -I V E V E E T N Y K N L V -N Y T K L T N E -S H N I L V N R L I S E Y I T K P Y E L R L D L S E R Y S N R D
MGV-GENOME-0003624_CDS_0005 E D E L K S I L E K K -Y K -K I D A Q F K L L R K I ---A D I E T A K K -M L E E I W D L K S F A N A V E L E L I R (120)
E K L + L+ E ++ S V
AcrIIA19 L I E F K F M L I E Y C K -E A L Q D I K E L A N S D E A Y E T D E A F E A V F R Q L F E E V I S N P D T V L K A F H S
MGV-GENOME-0003624_CDS_0005 R G F Y N G -T S (129)
+
AcrIIA19 Y T S F L E E N K
MGV-GENOME-0003624_CDS_0005 5 AcrIF17 0.76 View Alignment MGV-GENOME-0003624_CDS_0005 M I Q H K T W N V R D ----Q -------------------------------------T E D E L K S (60)
M + D
AcrIF17 M F S -E I -K F S S L S D H -A L A E L I K M A M E E F Q Q R L I K P G V N T I K T V D V E P V V L H A P S D N E M V
MGV-GENOME-0003624_CDS_0005 I L E K K Y K K I D A Q F K ---L L R K I A D I E T A K K M L E E I W D L K S F A N A V E L E L I R R G F Y N -G -T (120)
+ KK A K + +K +K + + ++
AcrIF17 F I N N C L K K R R A G E Y I H A S M -K D K Y R D L T R K Y P Q W F S -V K A Y P D D L R G S V S K H Y V D Y F T K K
MGV-GENOME-0003624_CDS_0005 S (121)
AcrIF17 E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;