3D Structure for MGV-GENOME-0003624_CDS_0005 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.66 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0003624_CDS_0005 1 AcrIE6 0.73 View Alignment MGV-GENOME-0003624_CDS_0005 M I Q H K T W N V R D Q T E D -E L K S I L E K K Y K K I D A Q F K L L R K I -A ---D I E T A K K M L E E I W D L K (60)
M + + L + + +D L + + + + I
AcrIE6 M -N N ---D -----T E V -L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L
MGV-GENOME-0003624_CDS_0005 -S F -A N A V E L E L I R R G ----F --Y N -G --T S (91)
S + L
AcrIE6 A S -R R A E L I E I L E E Q Y P G H A A D L S -I K N L C P
MGV-GENOME-0003624_CDS_0005 2 AcrIE1 0.64 View Alignment MGV-GENOME-0003624_CDS_0005 M I Q H --K -T W N V ---R D -Q -----------T E -D -E -L -K -S -I L -E K -K Y K -K I D ----(60)
M + + + I +
AcrIE1 M E K K L S D A Q V A L V A A W -R -K Y P D L R E S L E E A -A -S -I -L -S -L I -V F -Q -A E T -L S D Q A N
MGV-GENOME-0003624_CDS_0005 A -Q F K L L -R K -I A D I E T A K K M L E E I W D L K S F A N A V E L E L I R R G ----F -Y N --G -T S (117)
R +E A I + V E+ +G
AcrIE1 -E L A N Y -I R -R -Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A -I D R D V D
MGV-GENOME-0003624_CDS_0005 3 AcrIIC4 0.61 View Alignment MGV-GENOME-0003624_CDS_0005 M I Q H -K T -W -N -----V ---R -D -Q ----T E D E L K S I L E K K Y K K I D A Q F K L L R K I -A D I E (60)
M + + +K + + E
AcrIIC4 M K I T S S N F A T I A T S E N F A K L -S -V -L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E
MGV-GENOME-0003624_CDS_0005 T A K K M L -E E I W D L -K S F -A N -A V E L E L I R R G F Y N G -T S (98)
A K E + +I +G +
AcrIIC4 L A E K F N K E ----A V N E -A -V E -K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0003624_CDS_0005 4 AcrIF23 0.60 View Alignment MGV-GENOME-0003624_CDS_0005 M I Q H K --T ---W --N V R D -------------------------------------Q ----(60)
M +
AcrIF23 M T N F Q T W L D S A -D I P -V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
MGV-GENOME-0003624_CDS_0005 ----------------------T E D E L K ---S -I L E K -K Y K K -I D A Q F K L L R K I A --D I E (120)
K +
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E -M A C D -P S G L -L T A A K F W I E N R N D S A Q
MGV-GENOME-0003624_CDS_0005 T A K K M L E E I W D L K S F A N A V E -L E L -----I -R -R -G ----F Y N G --T -S (169)
+ + L + +
AcrIF23 E I A G F V M Q Q K A L L A Q H R S A -K A A G Q A D K V -A -K -I -A A E Y N A L T A R W G F
MGV-GENOME-0003624_CDS_0005 5 AcrIF25 0.57 View Alignment MGV-GENOME-0003624_CDS_0005 M I Q H K T W ---N V -R D ----------Q ------------------------T E D E L K ----(60)
M + + E+
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V -K E S R L E G M K L T D W I T G R V E A K A L S I -A E V L E E A A
MGV-GENOME-0003624_CDS_0005 -----------S -----------I L -----------------------E K -K Y K K I D A Q F (120)
+ Y +
AcrIF25 A M A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R -E G Y Q L L S S G L
MGV-GENOME-0003624_CDS_0005 -K L L R K -I ----A ---D I E T A K K M L E E I W D L K S F A N A V E L E L I R R G --F -Y N -G T S (176)
+ TA M+ ++ EL
AcrIF25 P D S Y S -G A V P N E -G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G ---G A -G K -E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;