3D Structure for MG721208_CDS_0240 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.07 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MG721208_CDS_0240 1 AcrIE6 0.78 View Alignment MG721208_CDS_0240 M T N L Q E R K Q E ----L K T -L L F N L A L E K N K A -T -D E T L L S V L E Q A H Q E V G N Q L R K V R K E I E (60)
M+N +E L+ L +++ +G QL R E+
AcrIE6 M N N D T E V L E Q Q I K A F E -L L A D E L K D R L P T -L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I
MG721208_CDS_0240 I L V E E K E R E F W N D I E F N G -L D (81)
++EE D+
AcrIE6 E I L E E Q Y P G H A A D L S I K N L C P
MG721208_CDS_0240 2 AcrIIC4 0.60 View Alignment MG721208_CDS_0240 M T -N L Q E R K Q E L K T -L L F ---N L A L -E K N K A T D E T L L S V L E Q A H Q E V G N Q L R K V R K E I E -(60)
M + + + N + + + + + + Q +R
AcrIIC4 M K I T -S S N ---F A -T -I A T S E N F -A K -L S V -L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N
MG721208_CDS_0240 --I -------L -V E -E -------K E R E F W N D I E F N -G -L D (100)
E K +E G
AcrIIC4 E N Y S K E L A E K -F N -K E A V N E A V E K L Q K A I D L A E K -Q G I Q F
MG721208_CDS_0240 3 AcrIE1 0.59 View Alignment MG721208_CDS_0240 M -T ---N L Q E R K -----------Q -E -------L -K -T -------L -L F -N -L A L E K N K A (60)
M +Q + A E
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R -E -S L E E A A S I L -S -L I V F Q A E T L -S D -Q -A N E L A N Y
MG721208_CDS_0240 T D E T L L S V L E Q A H Q E V G N Q L R K V R K E I E I L V E -E -K E R E F W N D I E F N G L D (110)
+ L +E A + K + D+ +D
AcrIE1 I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V -N Q -H -G I R V Y G D A I D R D V D
MG721208_CDS_0240 4 AcrIF23 0.58 View Alignment MG721208_CDS_0240 M T N L Q E R K Q E -------L K T ----------------------------------------(60)
MTN Q
AcrIF23 M T N F Q T W L D S A D I P V Q Q N -G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MG721208_CDS_0240 -------------L L F N L A L E K N K A T D E T L -L S -V -L E Q -A H -Q -E V -G N Q -L R -K -V R - (120)
+ + +EK + + + + +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V ----Q Q -M -N Q -D -Q A E M -A -C D -P -S G L -L T -A A -K
MG721208_CDS_0240 K E I E -I L V E E -----------------------------K E R E F W N D I E -F N G ---L D (178)
I + K +
AcrIF23 F W I -E N R -N D S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A -L T A R W G F
MG721208_CDS_0240 5 AcrIC3 0.57 View Alignment MG721208_CDS_0240 M -T N L Q E R K -Q ---E ---L K T -------L L F -N L A -L E K N K -A -------------T D E -(60)
M +++ L + + A + + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K -F M -A D -K T D R G L E S R F L V P E A G N R R I E V A
MG721208_CDS_0240 T L L S -V L E -Q A H Q E V G N Q L R K V R K E I E I L V E E K E R E F -W -N D I -E F -N G -L D (112)
A + + + L E + E I
AcrIC3 L T G -R -D L E -A A N A L F S E L A A S V E A T N E M Y R E L D A E -R -A -Q I N --K -A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;