3D Structure for MG592653_CDS_0047 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 80.67 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MG592653_CDS_0047 1 AcrIF4 0.72 View Alignment MG592653_CDS_0047 M N D -F ---K -D -W -V S D V E I A E T L G N G W C V R I E G S D V F D D I N R Y G V -K ---T R -R T F -S I (60)
M ++ +++ + NGW I+ + V + G F
AcrIF4 M M T I S K T D I D -C -Y L Q T Y V V I D P V S N G W Q W G I D E N G V G G A L H -H G R V E M V E G E N G Y F G L R
MG592653_CDS_0047 A K G L T S E K E A R G V A R N -------W L E S Q I S R -----L E A T -E -A (104)
+EKEA +A L + +E A
AcrIF4 G A T H P T E K E A M A A A L G Y L W K C R Q D L V A I A R -N D A I E A E K Y R A K A
MG592653_CDS_0047 2 AcrIE9 0.63 View Alignment MG592653_CDS_0047 M N D F K D --W V S D V E I A E T L G N G W C V R I -E -G S -D V F -D D I N R Y G V K T R R T F S I A K G L T S E (60)
M + G + + G I G T
AcrIE9 M E M Q I N S R K L G R T I T F S R P G -A S Y I F A D L N G K S G T L G C Q I C S G G G T M G S T -L S -Y D G D --
MG592653_CDS_0047 K E A -R -G V A R N W L E -S Q -I -S -R -L E -A T E A (91)
+ +
AcrIE9 -D -Q -A -Q F E A I C R R -W Y -R -A -H V -R -G -E
MG592653_CDS_0047 3 AcrIF19 0.56 View Alignment MG592653_CDS_0047 M N D F K D W -V --S D V -E I --A E T -L G -N -G W -C V R I E G S D V F D -D I --N R --Y G V -K -T R -(60)
M + + + ++I D I
AcrIF19 M K P L H T M N Y D N N Q M S L V Y E S Y -D E Y G F E Y S V K L K I S V R D -Y R G -I D V --S A F N -A -F P -E
MG592653_CDS_0047 R T F S I ---A K G L T S E K E A R G V A R N W L E S Q I -S R L E A ---T -E A (103)
+ S E+ + + S + ++
AcrIF19 -W E D T L R M R D R V M S V E E I E N A M I S R Y K S L F I A P P D C T Y E -F D I
MG592653_CDS_0047 4 AcrIF1 0.56 View Alignment MG592653_CDS_0047 M N D F K D W ----V -S D --V E I A E T L G N G W C V R I E G S D V F D D I N R Y G V K T R R T F S I A K G L T S (60)
M + + + E G+ +R+E +
AcrIF1 M K F -I K Y L S T A H L N Y M N I A V Y E -N G S K I K A R V E N V V ------N G K -S V -G A -R D F D S T E Q
MG592653_CDS_0047 E K E A -R G -V A -R -N -W L E -S ----Q I S R -L E A T E -A (96)
+ L + + E
AcrIF1 L E S W F Y -G L -P -G -S G L -G -R I E N A M N -E I S R R E N P
MG592653_CDS_0047 5 AcrIA 0.55 View Alignment MG592653_CDS_0047 M N -D F K D W -V S D V E I A E T -L -------G N -G W C V --R I E G S -D V F D D I N R Y G V K -T --R R (60)
M +S + + G+ V + +
AcrIA M V E V K Q K -T L S Y K L K -I -N -T R D Y S I T L E A E L K A V I N V K G N D L V -Y E -D ---K -Q Q K F V G
MG592653_CDS_0047 T F S I A K G L T ------S E -K -E -A R -G -V A R N ----W -L -E -S ----Q I -S -R -L E A ---T (120)
+ + + + + A
AcrIA Y I E T I S S Y E T K N A K E N A D -E -I L -N -E R -F E K Y A N -G -L -K -V L E Q T -A -E -A I N A E I E -
MG592653_CDS_0047 -E A (123)
AcrIA I -E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;