3D Structure for MG592537_CDS_0115 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.08 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MG592537_CDS_0115 1 AcrIIA27 0.71 View Alignment MG592537_CDS_0115 M K T F K V S A -Q V V N I -Y G -N G -Q N V I N T T Y K A E S K E K A L Q G F I N Y L E S N S N -------L K T (60)
MKTF + + +N+ + I A ++ A +S L
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R D L T A
MG592537_CDS_0115 --------F -S -N -I K I E -G (80)
+ +++E
AcrIIA27 I D N T H R R A W G R R -Y L R V E E A
MG592537_CDS_0115 2 AcrIE2 0.66 View Alignment MG592537_CDS_0115 M K T F K V S A Q V V N I Y G N -G Q N V I N T T -Y K -A -E -S K E K A L Q G F I N Y L E S N S N L K T F S ---N (60)
M T + N + T A + + L F
AcrIE2 M N T Y L I D P R K -N N D N S G E R F ---T -V -D A -V -D I T A A A K S A A Q Q I L G -----E E F E G L V -
MG592537_CDS_0115 -I K I ---------------------------------E -G (100)
+
AcrIE2 Y -R -E T G E S N G S G M F Q A Y H H L H G T N R T E T T V G Y P F H V M E L
MG592537_CDS_0115 3 AcrIC9 0.60 View Alignment MG592537_CDS_0115 M K ----T -F K -V S A Q V V N -I Y G N G Q N V I N T T Y K A E S K E K A L Q G F I N Y L E S N S N L K -T -F S (60)
M + + + + + + L +
AcrIC9 M E T K M T S F -Y K -I T A ---Y --N ---S Q A -L Y -F W G T D A D V D -R Y V D W L N R D R E I -N -V -Y
MG592537_CDS_0115 -N -I K I ---------------------------E -G (96)
I
AcrIC9 A -A E A I P E A E W A Q Y E G R D D V L S G E E C G W D D F M S A E A
MG592537_CDS_0115 4 AcrIE8 0.56 View Alignment MG592537_CDS_0115 M K T F K V S A Q V V N I Y G N G Q N V I -N T -T Y K A E S K E K A L Q G F I N Y L E S -N S N L K T -----F -S (60)
M T ++ + + E + +
AcrIE8 M T T I T I N -T -Y ---D ----P E A R -F N M S G E E A K E F F A F V E E Q A K -V S -G F D V Y Y D S C T Y -
MG592537_CDS_0115 -----N -I K I -----E -G (78)
AcrIE8 V D E E S -E R F -V E K C F Q N Y
MG592537_CDS_0115 5 AcrIF5 0.54 View Alignment MG592537_CDS_0115 M -K T -F K V S A Q V V N I Y G N G -Q N -------V I N T T -Y K A E ---S -K -E K A L Q G F I N -Y L E S (60)
M + + KA Q S
AcrIF5 M S R P T V V T V T E T P R -N P G S Y E V N V E R D G K M V V G R A R A G S D P G A A -A A K A M Q M A M -E W G -S
MG592537_CDS_0115 -----N S N -L K -T ----F S N I K I -E -G (87)
AcrIF5 P N Y V I L G -S -N K -V L A F I P E Q L -R V K M
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;