3D Structure for MG592473_CDS_0249 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 83.68 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MG592473_CDS_0249 1 AcrIE6 0.76 View Alignment MG592473_CDS_0249 M T L L T Q G E T H S A V L K A I D -T E I K -N L K S M C A S Y -A L D F T L K G G E ---D N K L S C L L Y S A K V (60)
M+ E + I + + + Y +
AcrIE6 M N -N -D T E V ---L E Q Q I -K A F E -L L A D -E L K D R L P T -L ----E I L S P M Y T A V M V T Y D L I G
MG592473_CDS_0249 E A L E K I K R S I Q K E V T T Q Y N A K V A ---N N K E N -N (93)
L + + + QY ++A
AcrIE6 K Q L A S R R A E L I E I L E E Q Y P G H A A D L S I K N L -C P
MG592473_CDS_0249 2 AcrIE1 0.65 View Alignment MG592473_CDS_0249 M -T -L L T Q G ------E --------T H S A V L K A I -D ----T E I K -N L K S M C A S Y A L D F T L K (60)
M L + ++ + + +L A
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I -L -S L I V F Q A -E T L S D Q A N E L A N Y I R R Q
MG592473_CDS_0249 G G E D N K L -S C L -L Y S A K V E A L E K I K R S I Q K E V T T Q Y N A K V A N N K E N N (107)
G + C + + ++ Y + ++
AcrIE1 -G L E E A E G A C -R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A -I D -R D V D
MG592473_CDS_0249 3 AcrIIC4 0.63 View Alignment MG592473_CDS_0249 M T -L L T ---Q G --------E ------T -H -S -A V L K -A I D -T -E I K -N L K -S M C -A S Y A -(60)
M + + + + K + + + S
AcrIIC4 M K I T S S N F A T -I A T S E N F A K L S V L P K N H -R -E P I -K G L F -K -S -A V E Q -F S S -A R D -F F K
MG592473_CDS_0249 L --D F T L K G G -E D N K L S C L -L Y S -A K V E A L E K I K R S I Q K E V T T Q Y N A K V A N N K -E N N (117)
A+ + +QK + + + +
AcrIIC4 N E N Y S K E L -A E -K ------F -N K E ----A V N E A V E K L Q K -A I D L ----A E K Q -G I Q F
MG592473_CDS_0249 4 AcrIC3 0.58 View Alignment MG592473_CDS_0249 M T -L L T -Q G -E ------T H S A V L K A I D -T E I K -N L K -S -M C A S -Y A L D F T L K G G E -----(60)
M+ +T + V+ + K + L
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S -G Q V -K F -M A D -K -T D R G -L E S R F L V P E A G N R R I
MG592473_CDS_0249 ---D N K -L S C L L Y S A K V E A L E K I K R S I Q K -E V T -T -Q -Y N -A K V A -N N K E -N N (113)
+ + +A L + A NK
AcrIC3 E V A L T -G R D L E A A N A L F S E L A A S V E A T N -E M Y -R -E -L D -A -E R A Q I N K A L E G
MG592473_CDS_0249 5 AcrIF23 0.57 View Alignment MG592473_CDS_0249 M T -L L --T -Q G ----E T H S -A V L K -A I D --------------------------------(60)
MT + + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q -W I D L E T -G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
MG592473_CDS_0249 --------------------T E I -K -----------N -L K S M C A S Y A L D F T L K G G E D N K L (120)
E S ++ A + D+
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V -Q Q M N Q D Q A E M A C D -P S G L L T A A K F W I E -N R N D S A Q
MG592473_CDS_0249 S C L L Y S A K V E A L E K I K R S ----I Q K E -V T T Q -Y N A K V A N N K E -N -N (166)
+ AL +RS Q + A
AcrIF23 E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K -V A K I -A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;