3D Structure for MG592473_CDS_0249 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 83.68 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MG592473_CDS_0249 1 AcrIE6 0.87 View Alignment MG592473_CDS_0249 M T L L T Q G E T H S A V L K A I D -T E I K -N L K S M C A S Y -A L D F T L K G G E ---D N K L S C L L Y S A K V (60)
M+ E + I + + + Y +
AcrIE6 M N -N -D T E V ---L E Q Q I -K A F E -L L A D -E L K D R L P T -L ----E I L S P M Y T A V M V T Y D L I G
MG592473_CDS_0249 E A L E K I K R S I Q K E V T T Q Y N A K V A ---N N K E N -N (93)
L + + + QY ++A
AcrIE6 K Q L A S R R A E L I E I L E E Q Y P G H A A D L S I K N L -C P
MG592473_CDS_0249 2 AcrIIA34 0.82 View Alignment MG592473_CDS_0249 M T L -L T Q G -E T H S ---A V L -K -A I D -T E I K -N L K -S M C A S Y A L D F T L K -G -G -E -D N -K -(60)
M ++ + + + +
AcrIIA34 M K N I A N E I K T I R Y A F E D G -R -S T Q -K S I M -R K I -K A L T D -Q F E T M ---D D L -I -D -S L -N
MG592473_CDS_0249 L -S C L -L Y S A K V E A L E K I K R S I Q K E V T -------T -Q Y -N ----A -K V ------A -----(120)
+ + + R I
AcrIIA34 -S Y -A D T H Y T W A I T Y F Q L A R I I I S F Q A S N N T T S E -K -K I -D L Q S G P I -E V N G K L -K I R V T
MG592473_CDS_0249 ------------------N N K E -N N (145)
AcrIIA34 V D E F M A D L A N W E H L E D I K K L A K E L A
MG592473_CDS_0249 3 AcrIE1 0.81 View Alignment MG592473_CDS_0249 M -T -L L T Q G ------E --------T H S A V L K A I -D ----T E I K -N L K S M C A S Y A L D F T L K (60)
M L + ++ + + +L A
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I -L -S L I V F Q A -E T L S D Q A N E L A N Y I R R Q
MG592473_CDS_0249 G G E D N K L -S C L -L Y S A K V E A L E K I K R S I Q K E V T T Q Y N A K V A N N K E N N (107)
G + C + + ++ Y + ++
AcrIE1 -G L E E A E G A C -R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A -I D -R D V D
MG592473_CDS_0249 4 AcrIF15 0.81 View Alignment MG592473_CDS_0249 M T L -L T Q G E T H S A V L K A I D T E I K N L K S M C A S Y A L D F T L -K G G E D N K L S C L L Y S A K V E A L E (60)
MT E + ++K+M S + GE+ + ++
AcrIF15 M T T I T I A Y E V -------S N D K V E T I K T M V E S Q Q I H N V N F -N G E E F T ---I E R G D -F T S I D
MG592473_CDS_0249 K I K R S I Q K -E V T -T -Q Y -N A K V A N N -K E N N (90)
K + + +
AcrIF15 K D E A E H V -K L L -N -K I -Q -D I I H --G --Y S
MG592473_CDS_0249 5 AcrIF2-IC2 0.80 View Alignment MG592473_CDS_0249 M T -L L T Q G ----E T H S A V L K A I D --T E I K -N L K -S ---M C A S Y A L D F T -L K G -G E ----D (60)
M T +H + A + I +K + T
AcrIF2-IC2 M A T K -T A -Q M I A Q Q H K D T V A A C E A A E A I -A I A K D Q V W D -G E G -Y T K Y T F -D D N S V L I Q S -
MG592473_CDS_0249 N K -L ---S C L L Y S A K V E A L E K I K R -S I Q K E V T T Q Y N A K V A N N K -E N N (107)
+ + + + + + E
AcrIF2-IC2 G -T T Q Y A M D A D D A D S I K G Y A D W L D D E A R S A E A S E I E R L L E S -V E E -E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;