3D Structure for MF959999_CDS_0058 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 83.35 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MF959999_CDS_0058 1 AcrIE6 0.74 View Alignment MF959999_CDS_0058 M N N N V S L T K -D -E -A -R -V A L A G L Q M H T R W L K N I R D Q L -P ---Q ---E P E A L E L N Q E L T E (60)
MNN T + LK +L +L
AcrIE6 M N N D ---T -E -V -L -E -Q -Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A
MF959999_CDS_0058 T Y E A L -V E K I K Q E L G L -N R R Y --S --K P (88)
+ A +E + P
AcrIE6 S R R A E L I E I L E E Q Y P G H A A D L S I K N L C P
MF959999_CDS_0058 2 AcrIIC4 0.62 View Alignment MF959999_CDS_0058 M N -N ---N V -S --L ---------T -K D E A R V A L A G L Q M H T R W L K ---N I R D Q L P Q E P E A L (60)
M + + K + + E++
AcrIIC4 M K I T S S N F A T -I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A
MF959999_CDS_0058 -E -L N Q E L T E T Y E A L V E K I K Q E L G L N R R -Y -S K P (94)
N E+ + K+ +
AcrIIC4 E -K F N K E A V N E A V E K L Q K A I D L A E K ---Q -G I Q F
MF959999_CDS_0058 3 AcrIE1 0.59 View Alignment MF959999_CDS_0058 M N -N N ---V -S -L ----------T ----K -D -E ----A R V -A L A G L Q M H T R W L K N I R D Q L (60)
M + + ++ + + + + +
AcrIE1 M E K K L S D A -Q -V A L V A A W R K Y P D L R E S L -E -E -A A S I L S -L I V F Q A E T L S D Q A N E L A N Y I
MF959999_CDS_0058 P -Q E ---P E -A L E -L N Q E L T E T Y E A L V E K I -K -Q -E -L -G L ----N R R -Y -S K -P (115)
Q E A +
AcrIE1 R R Q G L E E A E G A C -R N I D I M R A K W V E V C G E -V -N -Q -H -G I -R V Y G D -A I -D R D V D
MF959999_CDS_0058 4 AcrIC3 0.53 View Alignment MF959999_CDS_0058 M N N N V S --L ----------------T K D E A R V A L A G L Q M H T ---R -W L K ----N I R D -Q -(60)
M+ + ++ + +
AcrIC3 M S I -Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G L E S R -F L V P E A G N R R I -E V A
MF959999_CDS_0058 -L P -Q E P E A L E L N Q E L T E T Y E A L V E -K I K Q E L -G L ---N R R Y S K P (105)
A L +EL + EA EL +
AcrIC3 L T G R D L E A A N A L F S E L A A S V E A T N -E -M Y R E L D A E R A Q I N K A L E G
MF959999_CDS_0058 5 AcrIIA28 0.53 View Alignment MF959999_CDS_0058 M N N -N -V S L -----T K D E A R V A L A G L Q M H T -R W L K -N I R D Q L ---P Q -E P E A L E -L -N -Q (60)
M + D L + + P +
AcrIIA28 M K T I F T K K -Q T E E L L N D I S I E K Q K E L F N S M H D F R -S Q H A K -E A R I P G W S -D K Y N K -L -E K
MF959999_CDS_0058 E L T E T Y E A L V E K I K Q E L G L --------N R R Y -S -K P (96)
E + L N+
AcrIIA28 K M L S D F E E V T G I K Y D T L E S E L I W D N L S N K -F L -Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;