3D Structure for KY794642_CDS_0173 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.09 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment KY794642_CDS_0173 1 AcrIE6 0.77 View Alignment KY794642_CDS_0173 M K D L Q E ----R -K -R E -L K T L L F N L A I E K N R A T -D E Q L R D V L E Q S H Q E V M N Q L N K V R K E I (60)
M +E + L+ L + ++ + + QL R E+
AcrIE6 M N N D T E V L E Q -Q -I K -A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L
KY794642_CDS_0173 E I L V E E K E R E F W N D F D F N G -L D (82)
++EE D
AcrIE6 I E I L E E Q Y P G H A A D L S I K N L C P
KY794642_CDS_0173 2 AcrIE1 0.61 View Alignment KY794642_CDS_0173 M -K ---D L Q E R K ----------R -E -------L -K T -------L L F -N L A I E K N R A T D E Q (60)
M K D+Q R + + L A E Q
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E -S L E E A A S I L -S L I V F Q A E T L S D -Q A N E L A N Y I R R Q
KY794642_CDS_0173 L R D V L E Q S H Q -E V M N Q L N K V R K E I E I -L -V E -E K E R E F W N D F D F N G L D (108)
+ +E + K + D +D
AcrIE1 G L E E A E G A C -R N I D I M R A K W V E V C G -E -V -N Q -H G I R V Y G D A I D R D V D
KY794642_CDS_0173 3 AcrIIC4 0.59 View Alignment KY794642_CDS_0173 M K -D L Q E R K R E L K T L L F N L A I E K N R A -T D E Q L R D V L E Q S H Q E V M N Q L N K V R K E I E ---I -(60)
MK + + T N A + + R+ + + Q + +R
AcrIIC4 M K I T -S S N F A T I A T -S E N F A -K L S V -L -P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S
KY794642_CDS_0173 ------L -V E -E ----K E R -E F W N D -F ---D F -N -G --L D (100)
E + +
AcrIIC4 K E L A E K -F N -K E A V N E A V -E -K L Q K A I D L A E -K -Q -G I Q F
KY794642_CDS_0173 4 AcrIF23 0.59 View Alignment KY794642_CDS_0173 M K D ---L Q E R K R ----E L K -T ---------------------------------------(60)
M + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q -N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
KY794642_CDS_0173 -------------L L F N L A I E K N R A T D E Q L -R D -V -L E Q -S H -Q -E V -M N Q -L N K -V R -K (120)
+ + +EK Q + + +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V ----Q Q -M -N Q -D -Q A E M -A -C D -P -S G L -L T A A -K F
KY794642_CDS_0173 E I E I L V E ----E ----------------------K ----E R -E F -W N D -F D F N -G ---L D (180)
IE
AcrIF23 W I E N R -N D S A Q -E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V -A K -I A A -E Y N A -L T A R W G F
KY794642_CDS_0173 5 AcrIC3 0.57 View Alignment KY794642_CDS_0173 M -K D L Q E R K -R ------E -------L K T -------L ----L F ---N L A I E K N R A T D E -Q L (60)
M ++ R L + NR +
AcrIC3 M S I Q V T S T N G R T V N L E I -E L G S V V A S S G Q V K F M A D K T D R G L E S R F L V P E A G N R R I E V A L T
KY794642_CDS_0173 R D V L E -Q S H Q E V M N Q L N K V R K E I E I L V E E K E R E F W N D F D F N G -L D (105)
+ + + L E + E
AcrIC3 -G R D L E -A A N A L F S E L A A S V E A T N E M Y R E L D A E -R A Q I N -K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;