3D Structure for KX817173_CDS_0144 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.11 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment KX817173_CDS_0144 1 AcrIE6 0.71 View Alignment KX817173_CDS_0144 M S A T R S Y V E L L E A H A T R L R T V N A R M A E G M L A A A E R -G D R D T V R A T A E A M R L N G A E A E R Y Q (60)
M + E+LE + + + + E A L G +
AcrIE6 M -N --N D T E V L E Q Q I K A F E L L A D E L K D R L P T L -E I L --S P M Y T A V M V T Y D L I G K Q L A S R R
KX817173_CDS_0144 T Q A S W H R -H D N G E T V L V R P M V K P W S D (86)
+ ++ +K
AcrIE6 A E L I E I L E E Q Y P G H A A D L -S I K N L C P
KX817173_CDS_0144 2 AcrIE1 0.64 View Alignment KX817173_CDS_0144 M S -A ---T R S Y V E ----L --------L -E ----A ----H -A -T -R -L R T -V N A -R M A E G M (60)
M + A
AcrIE1 M E K K L S D A Q V A L V A A W R -K Y P D L R E S -L -E E A A S I L S L -I -V -F -Q -A E T -L S D -Q A N E L
KX817173_CDS_0144 L A A A E R G D R D T V R A T A E A M R L N G A E A E R Y Q T Q A S W H R H D N G E T V L V R P M V K P W S D (115)
+ + R + A R + + G + + D
AcrIE1 A N Y I R R Q G L E ---E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R -V Y G D A I D R D V D
KX817173_CDS_0144 3 AcrIF23 0.61 View Alignment KX817173_CDS_0144 M S A T ---R S ----Y V -E -L L E ---------------------------------------(60)
M+
AcrIF23 M T N F Q T W L D S A D I P -V -Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
KX817173_CDS_0144 ---A ----------H A T R L R T V N A -R M A E -G M L A A A E R G D R D T -V R A T A -E A M R ---L N G (120)
A ++R + M A A +
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M -N Q D -Q A E M A C D P S -G L -L T A A K F W I E N R N D S A
KX817173_CDS_0144 A E A E R Y Q T Q A S W H R H D ------N -G E T V ---L V R P M V K P W ---S -D (166)
E+ Q G +
AcrIF23 Q E I A G F V M Q Q K A L L A Q H R S A K A -A G Q A D K V A K I A A E Y N A L T A R W G F
KX817173_CDS_0144 4 AcrIIC4 0.59 View Alignment KX817173_CDS_0144 M S A -T R -----S ----Y V E ----L L -E ----A H A T R L R T V N A R M A E G M L A A A E R --G D R D (60)
M + + L + L +
AcrIIC4 M K I T S S N F A T I A T S E N -F A K L S V -L P -K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N ---Y
KX817173_CDS_0144 T V -R -A T A -E A M R L N G -A E A E -R Y Q T Q A S W H R H D N G E T V L -V R P M V K P W -S D (112)
A + EA + A + +
AcrIIC4 -S K -E -L A E K F N K E A V N -E A V E -K L Q K A I D L --------A E --K ---Q G I Q F
KX817173_CDS_0144 5 AcrIF25 0.58 View Alignment KX817173_CDS_0144 M S -A T R S Y V -E -------L -L E ---------------A ------------H A T R L R T V N A (60)
M + + + A
AcrIF25 M D N D D K K P D A L I H L R V P A E V -K G R W V K E S R L E G M K L T -D W I T G R V E A K A L S I A E V L E E A A
KX817173_CDS_0144 R M A E G M L A A A E R -----G ---D R D T V R A T A E A M R -----L N G A E A E R Y -Q T Q A S W H R ---(120)
MA T+ +A ++ ++A +
AcrIF25 A M A R S L E D S P I -F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S S G L
KX817173_CDS_0144 -H D -N -------G E -T V L -V -------R -P -----------M --V K P --W -S -D (174)
G +
AcrIF25 P D -S Y S G A V P N E G R T G W V T -A S Q M A R L F G -G E A L W I E R C Q Q -E L G G A G K E D -G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;