3D Structure for KX227758_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.41 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment KX227758_CDS_0002 1 AcrIE6 0.73 View Alignment KX227758_CDS_0002 M R E A I E ----E -L I R G L R E S A V E S R K E A D K A F D S R ------D L G L S G F H K G Q W C T F E G T -(60)
M I+ A E + + + + Q +
AcrIE6 M N N -D T E V L E -Q Q I K A F E L L A D E L K D R L P T L -E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L
KX227758_CDS_0002 A I A L E D L L S D H E E ---E --E -Q (82)
+ +LE+ H
AcrIE6 I E I L E E Q Y P G H A A D L S I K N L C P
KX227758_CDS_0002 2 AcrIE1 0.65 View Alignment KX227758_CDS_0002 M R ---E A I E E -----------L I ----R -----G ----L ---R E -S -A V -E S R K E A D K A F (60)
M + L + E + E+
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L -R E S L -E E A A S -I L S L I V F Q A E T -L -S D -Q A N E L A N Y I
KX227758_CDS_0002 D S R D L G L S G F H K G Q W C T F E G T A I A L E D -L ---L S D H -E E ---E E -Q (106)
L + + + + + +
AcrIE1 R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
KX227758_CDS_0002 3 AcrIIC4 0.59 View Alignment KX227758_CDS_0002 M R E --A -I -E -E -------------------L I R G L R E S A V E S R K E A D K A F -D S R --D L G (60)
M+ I+GL SAVE+ A F
AcrIIC4 M K I T S S N -F -A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E -
KX227758_CDS_0002 L S -G F H K G Q W C T F E G T A I A L E D L L S D H E E E --E Q (94)
L + + L ++ E
AcrIIC4 L A E K ---F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
KX227758_CDS_0002 4 AcrIC3 0.58 View Alignment KX227758_CDS_0002 M R -E -A I E ---E ------L I R ----G L R -E ----------S A V ---E S R K E A D K A F D -S -(60)
M + + + + +
AcrIC3 M S I -Q V T S T N G R T V N L E I E L G S V V A S S -G Q V K F M A D K T D R G L E S R F L V P E A G N R R I E V -A
KX227758_CDS_0002 R ----D -L -G L -S G F -H K G Q W C T F E G T A I A L E D L ---L S D H E E E E -Q (107)
D + + + E T +L
AcrIC3 -L T G R D L -E -A A N A -L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
KX227758_CDS_0002 5 AcrIF2-IC2 0.56 View Alignment KX227758_CDS_0002 M -R E A I -E E ---L ----I R G L R -E S A V E S R -----K E A --D K -A F D S R ----------D L (60)
M + A
AcrIF2-IC2 M A T K T -A Q M I A Q -Q H K D T V A A C E A -A E A I -A I A K D Q V W D G -E G -Y T K Y T F D D N S V L I Q S G
KX227758_CDS_0002 G L -S -G -F -H K G Q W C T F E G T A I A L E ----D L L -----S -D H E E -E --E Q (109)
+ G A L+ + E
AcrIF2-IC2 T T Q -Y -A -M D A D D A D S I K G Y A D W L D D E A R S A -E A S E I -E R L L E S V E E -E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;