3D Structure for KT932418_CDS_0039 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.18 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment KT932418_CDS_0039 1 AcrIIA27 0.75 View Alignment KT932418_CDS_0039 M K V F Q V S A -E V V N I -Y G -N G -E N V I N T T Y K A E N K E K A L Q G F I D Y L E S N R N -L I ---S ---(60)
MK F++ + E +N+ + I A N+ A + +
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R D L T A
KT932418_CDS_0039 ---------Y -S -N -V Q I K -G (81)
+ +
AcrIIA27 I D N T H R R A W G R -R -Y L R V E E A
KT932418_CDS_0039 2 AcrIE2 0.68 View Alignment KT932418_CDS_0039 M K V F Q V S A E V V N I Y G N -G E N V I N T T Y K -A -E ----N K -E K A L Q -G F ---I D -----Y L E S (60)
M + N + A+Q +
AcrIE2 M N T Y L I D P R K -N N D N S G E R F -T --V D -A -V -D I T A A A K -S A A Q Q I L G E E F E G L V Y R E T G -
KT932418_CDS_0039 -N ---R N -L -I S ------Y ---S --N ---V Q I -K -G (96)
+
AcrIE2 E S N G S G -M -F Q A Y H H L H G T N R T E T T V G Y P F H -V M E L
KT932418_CDS_0039 3 AcrIC9 0.61 View Alignment KT932418_CDS_0039 M K ----V F -Q -V S A E V V N -I Y G N G E N V I N T T Y K A E N K E K A L Q G F I D Y L E S N R N L I -S Y S N (60)
M F + + + +D L R + Y
AcrIC9 M E T K M T S F Y -K -I T A ---Y ----N -S Q -A L Y -F W G T D A D V D -R Y V D W L N R D R E I -N V Y A A
KT932418_CDS_0039 -----V Q -I -----------------------K -G (95)
+
AcrIC9 E A I P E A -E -W A Q Y E G R D D V L S G E E C G W D D F M S A E A
KT932418_CDS_0039 4 AcrIF19 0.58 View Alignment KT932418_CDS_0039 M K ----------V F Q V S A E V -V N I Y G N G -E N V I N T T Y K --A E ------------------(60)
MK ++ E YG +
AcrIF19 M K P L H T M N Y D N N Q M S L V Y E S Y -D E Y G -F E -Y S V K L K I S V R D Y R G I D V S A F N A F P E W E D T L
KT932418_CDS_0039 -------N K E K A L Q G F I D Y L E S N R N L -I S Y S N V Q -I -K -G (100)
+ E + + I S I +
AcrIF19 R M R D R V M S V E E I E N A M I S R Y K S L ---F I A P P D C T Y E F -D I
KT932418_CDS_0039 5 AcrIE8 0.56 View Alignment KT932418_CDS_0039 M K V F Q V S A E V V N I Y G N G E N V I -N T -T Y K A E N K E K A L Q G F I D Y L E S N R N L I S -Y -----S -(60)
M ++ + E + + + +
AcrIE8 M T T I T I -N T -Y -----D --P E A R -F N M S G E E A K E F F A F V E E Q A K V S G F D V Y Y D S C T Y V -D
KT932418_CDS_0039 N ----V -Q I ----K -G (76)
AcrIE8 -E E S E R F V -E K C F Q N Y
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;