3D Structure for KM507819_CDS_0311 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 82.33 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment KM507819_CDS_0311 1 AcrVA5 0.74 View Alignment KM507819_CDS_0311 M G I Q H I T R T T D N G E I T G Y Q V Q G K V A Q L Q Y W F V K R G I V A P D L D Y D R V A F I D S L Y V D P D N R G (60)
M I + +G + Y + + ID + V +
AcrVA5 M K I E -L --------------S G --G Y I C Y S I -E ----------E D E V T I D M V E V T -T -K R
KM507819_CDS_0311 N G E G T E L M N A F I D A A D -D S D C I I L E C D T G -E -D -N E F N L K E W Y E G F G F E V L I N C -E Y P I M (120)
+G G+ L D+A I L + + L E+Y FE + +M
AcrVA5 Q G I G S Q L I D M V K D V A R E V G L P I G L Y A Y P Q D D S -I S Q E D L I E F Y F S N D F E Y D P D D V D G R L M
KM507819_CDS_0311 I L S (123)
S
AcrVA5 R W S
KM507819_CDS_0311 2 AcrIB1 0.68 View Alignment KM507819_CDS_0311 M G I Q H I T R T ---T ----D ------------------------N --------G -E I T G Y Q -(60)
M + + + Y
AcrIB1 M E S K N L R K L L N E Y E E I D -I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V V
KM507819_CDS_0311 V ---Q -G K V A Q L Q Y W F V K R -----G -----I V -A --------------P -D L -D -Y D R V A (120)
+ + R I
AcrIB1 F S E D -N E I L G Y F T I -A N -R S L V I P -K E N F G I -L S K T Q Q K K L G N S A A I L K N G -D -L M T S S F
KM507819_CDS_0311 F I D S L Y V D P -D N -R -G N G E G T E L M N A F I D A A -D -----D S D C I I L E C D T G E D N E F N L K E W (180)
+ +L D G EL + D+ I LEC E L +
AcrIB1 L L G Q L G K N Y S D D I -E N L I T G R E L L T F A Y D L F L K I K E L I N V K Y I W L E C Q -N ---E P K L I S F
KM507819_CDS_0311 Y E G F G F E V L I N -C ---E Y P I M I -L -S (206)
Y FGF L + +MI
AcrIB1 Y Q N F G F K M L E S L T S E E G L K V M I M E L K
KM507819_CDS_0311 3 AcrIF5 0.43 View Alignment KM507819_CDS_0311 M G -I Q H I T R T T D N G E I T G Y Q V Q -G K V A Q L -Q Y W F V K R G I V A P D L D Y D R V A F I D S L Y V D P D (60)
M + +T T ++ +
AcrIF5 M S R P T V V T V T -E T P R -----N P G -S ---Y E -----------V -N V E R D G K M V V G R A R A G -
KM507819_CDS_0311 N R G N G E G T -E L M N -A F -I D A A D D S D C I I L E C D T G E D N E F N L K E W Y E G F G F E V L I N -C E -Y (120)
+ + ++ + VL+
AcrIF5 S D P G A A A -A K -A M Q M -A M E W -G S P -N Y V I L G -----S ----------N -K -V L A F I -P E Q
KM507819_CDS_0311 P I M I L -S (127)
+ +
AcrIF5 -L R V -K M
KM507819_CDS_0311 4 AcrIIC3 0.40 View Alignment KM507819_CDS_0311 M G I Q H I T R T T D N G E I T G -Y Q V Q G K V A Q L Q Y W F V K R -G I V A -P D L -D Y -D R -V A -F ---I D (60)
M I T+ NG + L ++ L A
AcrIIC3 M F K R A I I F T S F N G F E K V S R T E ---K R R L A K I I -N A R V S I I D E Y L R A K D -T N -A S L D G Q Y -
KM507819_CDS_0311 -S L Y V D P D N R G N G E G T E L M N A F I D A A D -D -S D C I -I L E C D T G E D N E F N L K E W Y E G F G F E V (120)
+ TE A+ + E L F +
AcrIIC3 R A F L F N D ---E S P A M T E F L A K L K A F A E S C T G I -S I D A W E -I E E S E Y V R L P V E R R D F -L A A
KM507819_CDS_0311 L I N C E -Y P I M I L S (133)
+
AcrIIC3 A N ---G -K E I F K I
KM507819_CDS_0311 5 AcrVIA2_new 0.40 View Alignment KM507819_CDS_0311 M -G -I Q H I T R ---T T D N -----G E I T G Y Q V --Q G -K -V A Q L Q Y W -F V K R G I V A P D L D Y D R (60)
M Q+I+ + +G V D
AcrVIA2_new M K N I H Q K I Q -L N K L Q V K T V Q N K -G K D L L I N A P T G S G K T E A S L -L A -V S ------D -A S K S
KM507819_CDS_0311 V A F I D S L Y -V D P D N R -G N G E G T -E L M N -A F -I -D A -A D -------------D --------(120)
V + N L + +
AcrVIA2_new V S Y L L ---P -T V --V S T N V M Y -L R L -K R D -Y -K L -N L S V Q T S T K K E I S N F A E G V H I K L E C
KM507819_CDS_0311 ----------------S D C I I L E C D -T G E D N -E -F -N L -K E W Y E G F G F E V -L I N --C -E - (180)
D II + + E F +
AcrVIA2_new P D F A L I D F I K T G K K T L G D T I I C D E F D H Y P E M V -K -S A -L M E Y K H T F S E T Q I I F V S A T L N K
KM507819_CDS_0311 ------------------------------------------------------------ (240)
AcrVIA2_new E S L M G I D L E E I A L D T E K N L I K Y K V Y P N D D F R M D D I I N N G K A Y G K K I G I I F N S I S Q L E C F I
KM507819_CDS_0311 ------------------------------------------------------------ (300)
AcrVIA2_new K P G E D F Y D D H F S K F K K G E N D Y I I H S Q V D D Y D K A L A E N A I V N N D F S V L I G T D S I S Y S I D V N
KM507819_CDS_0311 ------------------------------------------------------------ (360)
AcrVIA2_new F D I L I M M A S S E M A T N I Q R L G R C N R L N K H V T D Y N L Y F F G S Y L S D L K A P F I N E N V A F N N L E R
KM507819_CDS_0311 ------------------------------------------------------------ (420)
AcrVIA2_new I T S S H L C I S R K N I N E I K K E L P V S E I M E Y I E V K K H V L D E E E S L R P I P F K V R R G I E K E V V K F
KM507819_CDS_0311 ------------------------------------------------------------ (480)
AcrVIA2_new N A K G L K Q T K V I K T Y Q T F N M M D L K Y A F C E E Y Y Y D K K N S R A L D V I Q Q F D F E N D W F D R G D F T V
KM507819_CDS_0311 ------------------------------------------------------------ (540)
AcrVIA2_new K L Y N L K T E Q Q A L K Q L L L K L E E Y I E P E A P D E T D E D F Y Y R N P D I L L K Y T D Y D K L F I K G W T Y S
KM507819_CDS_0311 ------Y P I M I L S (553)
I +
AcrVIA2_new I L S I D G K T I Y -I A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;