3D Structure for KM373208_CDS_0006 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 97.34 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment KM373208_CDS_0006 1 AcrIIA7 0.87 View Alignment KM373208_CDS_0006 M T F E E I L P L I K K G K K A S R T G W N G K D M F V V A -Q K G -Y P E G I P -A ----N K ----Q T A -D A -(60)
MTF +L +K+G+ + R GWNGK MF+ P +
AcrIIA7 M T F G Q A L E S L K R G H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q V K S L P E S F K R W V A -N N
KM373208_CDS_0006 Y E L E E G A L F K V E P Y L Q M R T A T G S H V M W C I S N -L D V F A N D W E V Y N K (105)
E K YL M+ A G+ V + + D ANDW +
AcrIIA7 H G D S E T D R I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V -E
KM373208_CDS_0006 2 AcrIIA12 0.77 View Alignment KM373208_CDS_0006 M T ---F -E E I ---L P L I K -K -G K K A S R -T G W -N -G --K D M F V V A Q K G Y P E G -I P A N -K -Q (60)
M+ ++ + +K + + N
AcrIIA12 M S K T M Y K N D V I E L I K N A K T -N N E E L L F T S V E R N T R E A A ----------T Q -Y F R C P E -K H
KM373208_CDS_0006 T A D A Y E L E E G A L F K V E P Y L Q M R T A T G S H V M W C -I S N L D V F A -N D W E -V Y N K (111)
DA F + +
AcrIIA12 V S D A G V Y Y G -E D F E F D G F -E I --F E D -D L I Y T R S Y D K ----E ----E --L N
KM373208_CDS_0006 3 AcrIE9 0.75 View Alignment KM373208_CDS_0006 M T F E E I L P L I K K G K K A S R T G W N G K D M F V V A Q K G Y P E G I P A N K Q T A D A Y E L E E G A L F K V E P (60)
M K G+ ++ + G + G
AcrIE9 M E M Q I N S --R K L G R T I T F S R P -G A S Y I F A D L -N G K S G T L G ------C Q I C S G -G -G T M G -
KM373208_CDS_0006 Y -L Q M R T A T G S H V M W C I S N L D -V F -A N -D -W E V Y N K (96)
L + G +
AcrIE9 S T L ---S Y D G D D Q A Q F E A I C R R -W Y -R A -H V -R G -E
KM373208_CDS_0006 4 AcrIIA4 0.74 View Alignment KM373208_CDS_0006 M T F E E I L P L I K K -G K K A S R T G W -N -G -K D M F V V A Q K G Y P E G I P A N K Q T A D A Y E L E E G -A L (60)
M+ +++ IK + +G + + ++ Y + E
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T D S N S I T Q L I I R V N N -----------D G N E Y V I S E S E -N
KM373208_CDS_0006 F K V -E P Y L Q M R T A T G -S H V M W C I S N L D V F A N -D -----W -E V Y N K (105)
+ E ++ + F N
AcrIIA4 E S I V E K F I S A F K ---N -G W N Q E Y E D E E E F Y N D M Q T I T L K S -E -L N
KM373208_CDS_0006 5 AcrIF19 0.73 View Alignment KM373208_CDS_0006 M -T F E E I L P L I -K K G K K A S -R -T -G W -N ---G K D M F V V A Q K G Y P E G I P -A N K Q T A D A Y -E (60)
M S + + GI
AcrIF19 M K P L H T M -N --Y -D N N Q M S L V Y E S Y D E Y G F E Y S V K L K I S V R D -Y R G I D V S A --F N A F -P -
KM373208_CDS_0006 -L E E G A L F K V -E P Y --L Q M R T -A --T G --S H V M W C I -S -N -L D V F A N D W E -V -Y -N K (117)
E L + + S +
AcrIF19 E -W E D T L R M -R D --R V -M S V E E I E N A M I S R Y -----K S L -F -I A P P D --C T -Y E F D I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;