3D Structure for KF562340_CDS_0070 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 92.20 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment KF562340_CDS_0070 1 AcrIIA7 0.92 View Alignment KF562340_CDS_0070 M S E -E -I K V H F T N -N I G T K C V N R F R I N K E T Y C K L R G W D V P A N E D P L E V G Y L V V Y P D S K P N (60)
M+ + +
AcrIIA7 M T F G Q A L ---E S -L K R --------------------------------------------
KF562340_CDS_0070 H E H F R G Y I S W L P R A A F E A A Y C D V D K G C T F G H A V E L L K A G F K L A R K G W N G K G M Y I T L V T G E (120)
+ARKGWNGKGM I E
AcrIIA7 -----------G ---------------------------H L V A R K G W N G K G M F I -F M R P E
KF562340_CDS_0070 N -W A ---I -D K ---------------H -E -N T -V C ----E K R D W L G I K T V D N Q F M -P W V P (180)
I L K +D + W+
AcrIIA7 D S L P T N M I V -N Q V K S L P E S F K R W V A N N H -G D -S E -T D R I K F T A Y L C M K A A D G T I V N G W L A
KF562340_CDS_0070 S Q S D V L A E D W V L -V (194)
SQ+D LA DWV+
AcrIIA7 S Q T D M L A N D W V I V E
KF562340_CDS_0070 2 AcrIE9 0.85 View Alignment KF562340_CDS_0070 M S E E I K V H F T N N I G T K C V -N R F R I N K E T Y C K L R -G W D V P A N -E D P L E V G Y L V V Y P D S K P N (60)
M I +
AcrIE9 M E M Q I N ---S R K -L ----G R T -I ----------T -----F -S ------------------
KF562340_CDS_0070 H E H F R G Y I S W L P R A A F E A A Y C D V D K G C T F G H A V E L L K A G F K L A R K G -W N G K G -M -Y I T L V (120)
G + NGK +
AcrIE9 -----------------------R -------------P G A S Y I F A D L -N G K S G -T L G C Q I
KF562340_CDS_0070 T G E N W A I D K H E N T -V C E K R D W L G I K T V D N Q F -M P -W V P S Q S D V L A E D W V L -V (172)
+ D +
AcrIE9 C S ------G ----G -G T ---M G S T L S Y D G D D Q A -Q F E A I C R R W Y R A H V R -G E
KF562340_CDS_0070 3 AcrIIA4 0.84 View Alignment KF562340_CDS_0070 M S E -E I K V H F T N N I G T K C V N R F R I N -K E T Y C K -L R G W D V P A N E D P L -E V G Y L V V Y P D S K P (60)
M+ ++ N K T G + L++ +
AcrIIA4 M N I N D L I R E I K -N ---K --------D -Y T V K -L -S G T --D --S -N -S -I T Q L I I R V -N N -
KF562340_CDS_0070 N H E H F R G Y I S W L P R ----A -A -F E -A -A ---Y -C -D V D K G C T F G H A V -E L L -K A G F K L A R (120)
G + E +
AcrIIA4 ---D --G N E Y V I S E S E N E -S -I V -E -K F I S A F K -N G W N Q E --Y E D E -E E F -Y N D M Q T I T L
KF562340_CDS_0070 K G W N G K G M Y I T L V T G E N W A I D K H E N T V C E K R D W L G I K T V D N Q F M P W V P S Q S D V L A E D W V L (180)
K L
AcrIIA4 K S -E -------------------------------------------------------L
KF562340_CDS_0070 V (181)
AcrIIA4 N
KF562340_CDS_0070 4 AcrIF19 0.82 View Alignment KF562340_CDS_0070 M S E E I K V H F -T N N I G T K C V N R F R I N K E T Y C K L R G W D V P A N E D P L E V G Y L V V Y P -D S K P N H (60)
M ++ +VY
AcrIF19 M K -P L H T M N Y ---D ---------------------N ---------N Q M S L V Y E S -Y D E -Y
KF562340_CDS_0070 E H F R G -Y I S W L P R A A F E ----A -A Y C -------D ----V -D K G C T F G H A V E L L K A -G F K L (120)
+ A D+ + + + L
AcrIF19 G F E -Y S V K L K I S V R D Y R G I D V -S A F N A F P E W E D -T L R M -R D R V M S V E E I E N A M I S R Y K S L
KF562340_CDS_0070 A R K G W N G K G M Y I T L V T G E N W A I D K H E N T V C E K R D W L G I K T V D N Q F M P W V P S Q S D V L A E D W (180)
Y
AcrIF19 F I A P P -D -C T Y E F -----------------------------------------------
KF562340_CDS_0070 V L V (183)
+
AcrIF19 -D I
KF562340_CDS_0070 5 AcrIIA33 0.82 View Alignment KF562340_CDS_0070 M S E E I K V H F T N -N I G T K C V N R F R I N K E T Y C K L R G W D V P A N E D P L E V G Y L V V Y P D S -K P -N (60)
M + + + + ETY KL ++ GY+
AcrIIA33 M I K -W T G K -S -T -D -K G W I R --T V E A E T Y Y K L L E -------T L V D K G Y I -G D -Y -I D -S -
KF562340_CDS_0070 -H E H F R G Y I S W L P R A A F E A ----A ---------Y C -----D -----V -D K G C T F G H A -V E (120)
+ + A + T
AcrIIA33 D -S Q L F H E L A Y V -S P A V A D L E D R L N D E H Q V E Q A L -E D L E N -F D W N R -V F E K L T D Q Q -F -Q
KF562340_CDS_0070 -L L K A G F K L A R K G W N G -K G M Y I T L V T G E N W A I D K H E N T V C E K R D W L G I K T V D N Q F M P W V P (180)
+ AG +
AcrIIA33 T -A I A G C T --S Q A Y -Y Q -E --F E V ------------------------------------
KF562340_CDS_0070 S Q S D V L A E D W V L V (193)
+
AcrIIA33 -----------I E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;