Results - Acr-Aca DB

Anti-CRISPR Results - GCF_002838405.1 (Total 3 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Medium Confidence	Bifidobacterium breve	NZ_CP021392.1	WP_052789049.1	884217	884417	+	67	-3	4.5203	Acr	0.324201787	452	-4.650568	Not found in Prophage	Not found in Prophage	-	-	MLADKRARLVEQLAEIQDSIDFIDAKQRFYDNVLSGATPYVSALIPSAALAKESEEPGELKGAERK	No		Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium breve
Acr-Aca 1	Medium Confidence	Bifidobacterium breve	NZ_CP021392.1	WP_003828945.1	884566	885051	+	162	-11	4.3256	WP_078788209.1\|HTH_3-0-AcrVA5\|42.6\|3e-10	0.080678861	111	-3.4782076	Not found in Prophage	Not found in Prophage	PHAGE_Bacill_Pookie_NC_027394-gi\|100028\|ref\|YP_009152827.1\|\|3.24e-07	-	MSIGQVIKVVREERGLTQSQFAHKLFVTQQALSRWEKGTAEPSIDMIRLISTRFEVPMARLMEMPDNGFCQSCAMPFYRPEDHGTEPDGTRSGDYCNYCYDDGVFLQDYANSDELVAACAPMMAESCHISVEQAEDCMSALLPNLKRWRHQDEIDAVAEGE	No		Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium breve
Acr-Aca 2	Medium Confidence	Bifidobacterium breve	NZ_CP021392.1	WP_007056697.1	1318372	1318713	-	114	0.5	6.8556	Acr	0.178416803	1079	-5.4192314	Not found in Prophage	Not found in Prophage	-	-	MSSVTEVAVPTSDFDGNAPVNGSRCMASTFSESLYWRRSARRYELLGLVSWMLAALSCVVFLAILLAARNLLLPGFALVPVACGLACVGCWCDRNSRDAWDFAFWSLHAEVRQ	No		Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium breve
Acr-Aca 2	Medium Confidence	Bifidobacterium breve	NZ_CP021392.1	WP_007054321.1	1318844	1319086	-	81	1	7.1322	AcrIIA6-3-REF:638276882_____638275427_28\|HTH_XRE\|35.6\|2.9e-05	0.30941141	109	-3.4590695	Not found in Prophage	Not found in Prophage	PHAGE_Strept_Sfi19_NC_000871-gi\|9632918\|ref\|NP_049947.1\|\|1.21e-04	-	MSNMKRWLREHGISYAQLAKQLNQSQPSISQKVNLKTCWQFDDCRRLRDVYGLSSDFVQDLVPYEAKFAESVRDHEEVSV	No		Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium breve
Acr-Aca 3	Medium Confidence	Bifidobacterium breve	NZ_CP021392.1	WP_106629993.1	1432860	1433228	-	123	-4.5	4.722	Acr	0.572913409	47	-2.7975156	Not found in Prophage	Not found in Prophage	-	-	MAGGIYEQSEWPDSRWDCVTVCDGCHTVVWGTFWDDYDSAARDAYFARNGWRNYCVPGDTEILELCPACAVRALRRGETRGLADTWIHPARAYRHADQEVDAQLSARERVVANLLLTEGRTA	No		Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium breve
Acr-Aca 3	Medium Confidence	Bifidobacterium breve	NZ_CP021392.1	WP_085382558.1	1433228	1433449	-	74	-4	4.5219	WP_000272856.1\|HTH_XRE-3-AcrIIA15\|55.2\|3.9e-06	0.323440351	250	-4.1609054	Not found in Prophage	Not found in Prophage	PHAGE_Staphy_phi7401PVL_NC_020199-gi\|448244649\|ref\|YP_007392371.1\|\|1.13e-05	-	MDASPVKQWRQDHDILQKDLAAEMGMSPSTLSQKENGHLDWNRSDLAFLKQEKGLSSDFVLGFQRNLNDEEVA	No		Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium breve

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (JBrowse View)

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2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_002838405.1	NZ_CP021392	NZ_CP021392_1[126955;127291] (evidence-level=2), NZ_CP021392_2[1733347;1734058] (evidence-level=4), NZ_CP021392_3[1739125;1743074] (evidence-level=4), NZ_CP021392_4[2128423;2128569] (evidence-level=1), NZ_CP021392_5[2283431;2283507] (evidence-level=1),	5	Nb_arrays_evidence-level_1=2,Nb_arrays_evidence-level_2=1,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2	CAS-TypeIC[1744596;1752653],	1	CAS-TypeIC (n=1),