y
Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa009387m |
Family | GH16 |
Protein Properties | Length: 295 Molecular Weight: 34285.8 Isoelectric Point: 8.4228 |
Chromosome | Chromosome/Scaffold: 1 Start: 21457296 End: 21459443 |
Description | xyloglucan endotransglucosylase/hydrolase 5 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH16 | 40 | 211 | 1.5e-24 |
TWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGNYLFGHFHMQIKLVPGDSAGTVTAYYLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRI FLWFDPTAAYHSYSVLWNLYQIVFFVDDIPIRVFKNSKDLGVKFPFNQPMKLYSSLWNADDWATRGGLEKTD |
Full Sequence |
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Protein Sequence Length: 295 Download |
MASYQQWTLF VSLLCLVSAT MGAPPRKPIS VPFGRNYQPT WAFDHIKYFN GGNEIQLHLD 60 KYTGTGFQSK GNYLFGHFHM QIKLVPGDSA GTVTAYYLSS QNAEHDEIDF EFLGNRTGQP 120 YILQTNVFTG GKGDREQRIF LWFDPTAAYH SYSVLWNLYQ IVFFVDDIPI RVFKNSKDLG 180 VKFPFNQPMK LYSSLWNADD WATRGGLEKT DWSKAPFIAT YKGFHIDGCE ASVEAKFCAT 240 QGQRWWDQKE FQDLDANQWR RLKWVRQKFT IYNYCTDRVR YPTLPPECKR DRDI* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam06955 | XET_C | 2.0e-22 | 238 | 288 | 52 | + Xyloglucan endo-transglycosylase (XET) C-terminus. This family represents the C-terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET). Xyloglucan is the predominant hemicellulose in the cell walls of most dicotyledons. With cellulose, it forms a network that strengthens the cell wall. XET catalyzes the splitting of xyloglucan chains and the linking of the newly generated reducing end to the non-reducing end of another xyloglucan chain, thereby loosening the cell wall. Note that all family members contain the pfam00722 domain. | ||
cd02183 | GH16_fungal_CRH1_transglycosylase | 9.0e-23 | 45 | 222 | 193 | + glycosylphosphatidylinositol-glucanosyltransferase. Group of fungal GH16 members related to Saccharomyces cerevisiae Crh1p. Chr1p and Crh2p are transglycosylases that are required for the linkage of chitin to beta(1-3)glucose branches of beta(1-6)glucan, an important step in the assembly of new cell wall. Both have been shown to be glycosylphosphatidylinositol (GPI)-anchored. A third homologous protein, Crr1p, functions in the formation of the spore wall. They belongs to the family 16 of glycosyl hydrolases that includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues. | ||
pfam00722 | Glyco_hydro_16 | 4.0e-73 | 33 | 214 | 184 | + Glycosyl hydrolases family 16. | ||
PLN03161 | PLN03161 | 2.0e-101 | 1 | 288 | 292 | + Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional | ||
cd02176 | GH16_XET | 3.0e-166 | 30 | 288 | 261 | + Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16. Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005618 | cell wall |
GO:0005975 | carbohydrate metabolic process |
GO:0006073 | cellular glucan metabolic process |
GO:0016762 | xyloglucan:xyloglucosyl transferase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN07897.1 | 0 | 1 | 294 | 1 | 294 | xyloglucan endotransglycosylase [Malus x domestica] |
GenBank | ABB86296.1 | 0 | 1 | 294 | 1 | 294 | xyloglucan endotransglucosylase hydrolase [Rosa x borboniana] |
GenBank | ACA02823.1 | 0 | 1 | 294 | 1 | 294 | XET [Pyrus pyrifolia] |
GenBank | ACD03225.1 | 0 | 1 | 294 | 1 | 294 | xyloglucan endotransglucosylase/hydrolase 1 [Malus x domestica] |
RefSeq | XP_002297895.1 | 0 | 7 | 294 | 6 | 293 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1un1_B | 0 | 23 | 294 | 7 | 278 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1un1_A | 0 | 23 | 294 | 7 | 278 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1umz_B | 0 | 23 | 294 | 7 | 278 | A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. |
PDB | 1umz_A | 0 | 23 | 294 | 7 | 278 | A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. |
PDB | 2vh9_B | 0 | 10 | 288 | 12 | 290 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |