y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g011532m |
Family | CBM43 |
Protein Properties | Length: 484 Molecular Weight: 53121.4 Isoelectric Point: 5.0481 |
Chromosome | Chromosome/Scaffold: 00117 Start: 370186 End: 373921 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 366 | 447 | 9.2e-24 |
WCMLNPDAKDMSKLVDNIKYACTWSDCTALGYGSSCNNLDANGNASYAFNMYYQIKNQDELACGFQGLGKVTTQNLSQGQCS | |||
GH17 | 23 | 343 | 0 |
LGVNWGTQTTHQLPPKTIVQMLKDNGISKVKLFDAHQGTMIALAGSDIEVMVAIPNKDLLDMNSYDRAKQWVKRNVTRYNFKGGVSIKYVAVGNEPFLKA YNGSFLNTTFPALQNIQNALNEAGVGDSIKATVPLNADVYESPENNPYPSFGRFRTDILGQMTQIVEFLAKNNAPFTVNIYPFLSLYGNDDFPFNYAFFD GGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGYIEVYLFGLVDEDAKSIDP GYFERHWGIFRYDGQPKFAMD |
Full Sequence |
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Protein Sequence Length: 484 Download |
MSNPLILNLL LLFVILGSCV NGLGVNWGTQ TTHQLPPKTI VQMLKDNGIS KVKLFDAHQG 60 TMIALAGSDI EVMVAIPNKD LLDMNSYDRA KQWVKRNVTR YNFKGGVSIK YVAVGNEPFL 120 KAYNGSFLNT TFPALQNIQN ALNEAGVGDS IKATVPLNAD VYESPENNPY PSFGRFRTDI 180 LGQMTQIVEF LAKNNAPFTV NIYPFLSLYG NDDFPFNYAF FDGGTPIVDS GTGIQYTNVF 240 DANFDTLVSA LKAVGHGDMP MIVGEVGWPT DGDKNANNGN AYRFYNGLLP KLAANKGTPL 300 RPGYIEVYLF GLVDEDAKSI DPGYFERHWG IFRYDGQPKF AMDLSGQGQN KMLIGASGVK 360 YMPSQWCMLN PDAKDMSKLV DNIKYACTWS DCTALGYGSS CNNLDANGNA SYAFNMYYQI 420 KNQDELACGF QGLGKVTTQN LSQGQCSFII QLDPSYSPQS SSYSSSPSLW GLAFIMILTF 480 MLL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0006 | 251 | 335 | 89 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-13 | 365 | 434 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-27 | 365 | 448 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-73 | 23 | 343 | 324 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_176656.1 | 0 | 24 | 452 | 26 | 452 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_179534.1 | 0 | 6 | 452 | 3 | 448 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002277003.1 | 0 | 11 | 453 | 11 | 454 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319699.1 | 0 | 17 | 483 | 17 | 478 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525445.1 | 0 | 1 | 457 | 1 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 23 | 345 | 2 | 316 | A Chain A, Crystal Structure Of The C-Terminal Domain (Residues 83-215) Of Pf1911 Hydrogenase From Pyrococcus Furiosus, Northeast Structural Genomics Consortium Target Pfr246a |
PDB | 3f55_C | 0 | 23 | 345 | 2 | 316 | A Chain A, Crystal Structure Of The C-Terminal Domain (Residues 83-215) Of Pf1911 Hydrogenase From Pyrococcus Furiosus, Northeast Structural Genomics Consortium Target Pfr246a |
PDB | 3f55_B | 0 | 23 | 345 | 2 | 316 | A Chain A, Crystal Structure Of The C-Terminal Domain (Residues 83-215) Of Pf1911 Hydrogenase From Pyrococcus Furiosus, Northeast Structural Genomics Consortium Target Pfr246a |
PDB | 3f55_A | 0 | 23 | 345 | 2 | 316 | A Chain A, Crystal Structure Of The C-Terminal Domain (Residues 83-215) Of Pf1911 Hydrogenase From Pyrococcus Furiosus, Northeast Structural Genomics Consortium Target Pfr246a |
PDB | 3em5_D | 0 | 23 | 345 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |