y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g010142m |
Family | CBM43 |
Protein Properties | Length: 518 Molecular Weight: 56331.1 Isoelectric Point: 7.0491 |
Chromosome | Chromosome/Scaffold: 00007 Start: 2732822 End: 2735602 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 405 | 484 | 1.2e-25 |
WCVANPSQDLSDVANHIKLACSVADCTTLNYGGSCNGIGAKGNISYAFNSYYQLQMQNEKSCNFDGLGMVTFLDPSVGEC | |||
GH17 | 66 | 384 | 0 |
IGVNWGSVSSHKLKPSTVVDLLKDNKIQKVKLFDADPDALVALMRSGIQVMVGIPNEMLATLSSSTAASDLWVRQNVSRYLVKGGADIRYIAVGNEPFLT SYAGQFQSYVVPALLNLQQSLAKANLAGYVKLVVPCNADAYESSLPSQGAFRPELTQIMTQLVSFLNSNGSPFIVNIYPFLSLYGNSDFPEDYAFFEGTS HPVTDGPNVYSNAFDGNFDTLVAALSKLGYGQMPIVIGEVGWPTDGTISANLTAARTFNQGLINHVLSNKGTPLRPGAPSMDIYLFSLLDEGAKSILPGN FERHWGIFSFDGQAKYPLN |
Full Sequence |
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Protein Sequence Length: 518 Download |
MNKVASNCSA ESPFLFFDFE LEKMPQANRR NRRISSTSTS ASATSIIVIT TTLLLSFSLP 60 MTESAIGVNW GSVSSHKLKP STVVDLLKDN KIQKVKLFDA DPDALVALMR SGIQVMVGIP 120 NEMLATLSSS TAASDLWVRQ NVSRYLVKGG ADIRYIAVGN EPFLTSYAGQ FQSYVVPALL 180 NLQQSLAKAN LAGYVKLVVP CNADAYESSL PSQGAFRPEL TQIMTQLVSF LNSNGSPFIV 240 NIYPFLSLYG NSDFPEDYAF FEGTSHPVTD GPNVYSNAFD GNFDTLVAAL SKLGYGQMPI 300 VIGEVGWPTD GTISANLTAA RTFNQGLINH VLSNKGTPLR PGAPSMDIYL FSLLDEGAKS 360 ILPGNFERHW GIFSFDGQAK YPLNLGLGNK VLKNARNVQY LPSRWCVANP SQDLSDVANH 420 IKLACSVADC TTLNYGGSCN GIGAKGNISY AFNSYYQLQM QNEKSCNFDG LGMVTFLDPS 480 VGECRFPVGV TNTNSSGFRT HNRWSVICFL LVWFFIM* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.001 | 239 | 376 | 142 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-18 | 404 | 473 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-30 | 405 | 486 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-73 | 66 | 382 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB10499.1 | 0 | 33 | 517 | 21 | 502 | glucanase like protein [Arabidopsis thaliana] |
EMBL | CAN82722.1 | 0 | 61 | 508 | 1 | 447 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_193451.2 | 0 | 62 | 517 | 21 | 475 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002329964.1 | 0 | 42 | 517 | 5 | 484 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525026.1 | 0 | 53 | 513 | 14 | 473 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 66 | 385 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 66 | 385 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 66 | 385 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 66 | 385 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_D | 0 | 66 | 385 | 2 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |