y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_024799m |
Family | CE8 |
Protein Properties | Length: 165 Molecular Weight: 17880.6 Isoelectric Point: 9.6443 |
Chromosome | Chromosome/Scaffold: 06938 Start: 36697 End: 37191 |
Description | Pectin lyase-like superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 71 | 165 | 2.1e-24 |
ITVSKDGKGKFKTVTDAIKSIPSQNKERAIIKIGPGVYTEKIEIEKTKPFISFLGDPKAMPTLAFGGTARKYGTHYSGTVTVDSDYFMGVNIIFQ |
Full Sequence |
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Protein Sequence Length: 165 Download |
MARGHCVDAT HCVLIAILVV ATTVSSDDTT PIPADDSKVS NWFQTNVKPW KSRKGTLDPA 60 LEAAEAKSKI ITVSKDGKGK FKTVTDAIKS IPSQNKERAI IKIGPGVYTE KIEIEKTKPF 120 ISFLGDPKAM PTLAFGGTAR KYGTHYSGTV TVDSDYFMGV NIIFQ 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02773 | PLN02773 | 8.0e-17 | 68 | 165 | 109 | + pectinesterase | ||
PLN02671 | PLN02671 | 2.0e-17 | 68 | 165 | 110 | + pectinesterase | ||
pfam01095 | Pectinesterase | 5.0e-20 | 71 | 165 | 97 | + Pectinesterase. | ||
PLN02682 | PLN02682 | 2.0e-21 | 50 | 165 | 128 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 3.0e-75 | 8 | 165 | 159 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002309337.1 | 0 | 11 | 165 | 12 | 166 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002318197.1 | 0 | 7 | 165 | 4 | 162 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333446.1 | 0 | 4 | 165 | 2 | 163 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002336983.1 | 0 | 7 | 165 | 4 | 162 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511045.1 | 0 | 7 | 165 | 8 | 166 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0.000000002 | 71 | 165 | 9 | 104 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0.00009 | 73 | 126 | 7 | 60 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |