y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb05g003170.1 |
Family | GT29 |
Protein Properties | Length: 404 Molecular Weight: 44119.9 Isoelectric Point: 10.3465 |
Chromosome | Chromosome/Scaffold: 5 Start: 3549122 End: 3550355 |
Description | Glycosyltransferase family 29 (sialyltransferase) family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT29 | 171 | 379 | 1.4013e-45 |
RRRRFPTCAVVGNSGILIGSGRGTQIDAHDFIIRLNNAPVAGFAPDVGARTSLTLTHSFMLQDCAAPSAVVTTSGCGCHPYGRAVPLAMYVSNPAHLLYV LVCNATATPAAPFRLLLTDARLDALCASIAKYYSLRRFVAATGEPASSWTRRRDGKEPYFHYSSGLQAVVLALGVCDKVSMFGFGKAAGSKETEVHDLDA EYQFYGDLQ |
Full Sequence |
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Protein Sequence Length: 404 Download |
MAGSRSRITS ATAPAETRHR RRYLPLPPLM FLVLLLVYLS RRHPRAPPQY TYDDVLLRRL 60 AVTDVGGDQI AAEAAAMLAN ASISSHPSLH GNIHRLVYLR LPYNDSGTSR RRTMLRLRVP 120 YDKVPNDSSL LAGFRASLRS FLRAHQHRRR GYKNVAGLMD DVAGGLLGLR RRRRFPTCAV 180 VGNSGILIGS GRGTQIDAHD FIIRLNNAPV AGFAPDVGAR TSLTLTHSFM LQDCAAPSAV 240 VTTSGCGCHP YGRAVPLAMY VSNPAHLLYV LVCNATATPA APFRLLLTDA RLDALCASIA 300 KYYSLRRFVA ATGEPASSWT RRRDGKEPYF HYSSGLQAVV LALGVCDKVS MFGFGKAAGS 360 KETEVHDLDA EYQFYGDLQA RPEAVPFLGK APGFVLPPVK LYW* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00777 | Glyco_transf_29 | 2.0e-5 | 319 | 378 | 75 | + Glycosyltransferase family 29 (sialyltransferase). Members of this family belong to glycosyltransferase family 29. | ||
pfam00777 | Glyco_transf_29 | 2.0e-21 | 177 | 232 | 56 | + Glycosyltransferase family 29 (sialyltransferase). Members of this family belong to glycosyltransferase family 29. |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008373 | sialyltransferase activity |
GO:0030173 | integral to Golgi membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN30607.1 | 0 | 77 | 403 | 1 | 340 | unknown [Zea mays] |
RefSeq | NP_001150867.1 | 0 | 65 | 403 | 55 | 402 | sialyltransferase-like protein [Zea mays] |
RefSeq | XP_002449002.1 | 0 | 20 | 403 | 2 | 391 | hypothetical protein SORBIDRAFT_05g003150 [Sorghum bicolor] |
RefSeq | XP_002449004.1 | 0 | 54 | 403 | 42 | 400 | hypothetical protein SORBIDRAFT_05g003160 [Sorghum bicolor] |
RefSeq | XP_002449005.1 | 0 | 1 | 403 | 1 | 403 | hypothetical protein SORBIDRAFT_05g003170 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2wml_A | 0.00000000000002 | 88 | 371 | 1 | 279 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
PDB | 2wnf_A | 0.00000000000004 | 88 | 371 | 1 | 279 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
PDB | 2wnb_A | 0.00000000000004 | 88 | 371 | 1 | 279 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp |