y
Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s352_29V6.1 |
Family | AA6 |
Protein Properties | Length: 213 Molecular Weight: 22462.7 Isoelectric Point: 8.8987 |
Chromosome | Chromosome/Scaffold: 352 Start: 168135 End: 169611 |
Description | flavodoxin-like quinone reductase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA6 | 13 | 208 | 0 |
KLYIVYYSMYGHVAKMAEEIKKGASTVDGVEASLFQVPETLPPEVLHKMGAPAKNAEHPIIPIAQLTEADGFLFGFPTRYGMMCAQFKTFMDATGGLWRT QALAGKPAGLFVSTGTQGGGQETSALTAITQLAHHGMIFVPTGYTGGSGMFNLAEPKGGSAYGSGTFAGDGTRQPSKLELEQAFHQGKYVASVAKK |
Full Sequence |
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Protein Sequence Length: 213 Download |
MSAERFATMA TTKLYIVYYS MYGHVAKMAE EIKKGASTVD GVEASLFQVP ETLPPEVLHK 60 MGAPAKNAEH PIIPIAQLTE ADGFLFGFPT RYGMMCAQFK TFMDATGGLW RTQALAGKPA 120 GLFVSTGTQG GGQETSALTA ITQLAHHGMI FVPTGYTGGS GMFNLAEPKG GSAYGSGTFA 180 GDGTRQPSKL ELEQAFHQGK YVASVAKKLK HG* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00258 | Flavodoxin_1 | 9.0e-10 | 16 | 148 | 144 | + Flavodoxin. | ||
pfam03358 | FMN_red | 1.0e-14 | 26 | 156 | 134 | + NADPH-dependent FMN reductase. | ||
COG0655 | WrbA | 3.0e-36 | 9 | 211 | 210 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
TIGR01755 | flav_wrbA | 2.0e-56 | 12 | 209 | 199 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
PRK03767 | PRK03767 | 4.0e-69 | 12 | 210 | 200 | + NAD(P)H:quinone oxidoreductase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0010181 | FMN binding |
GO:0016491 | oxidoreductase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABR18269.1 | 0 | 12 | 210 | 3 | 200 | unknown [Picea sitchensis] |
RefSeq | XP_001758337.1 | 0 | 12 | 211 | 3 | 201 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001783083.1 | 0 | 9 | 212 | 1 | 204 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002283286.1 | 0 | 11 | 211 | 2 | 201 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319258.1 | 0 | 12 | 210 | 3 | 200 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3b6m_B | 0 | 13 | 210 | 3 | 197 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3b6m_A | 0 | 13 | 210 | 3 | 197 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3b6k_B | 0 | 13 | 210 | 3 | 197 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3b6k_A | 0 | 13 | 210 | 3 | 197 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3b6j_B | 0 | 13 | 210 | 3 | 197 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO911783 | 209 | 2 | 210 | 0 |
GO914001 | 209 | 2 | 210 | 0 |
EV551435 | 209 | 2 | 210 | 0 |
EX097043 | 208 | 3 | 210 | 0 |
GO914515 | 209 | 2 | 210 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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