y
Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.009G075400.1 |
Family | CBM22 |
Protein Properties | Length: 743 Molecular Weight: 83150.1 Isoelectric Point: 6.0801 |
Chromosome | Chromosome/Scaffold: 09 Start: 12467267 End: 12471784 |
Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM22 | 29 | 164 | 2.6e-31 |
IIINPQFDDGLNNWSGRGCKIALHDSMEDGKILPKSGKFFASATDRTQSWNGIQQEITGRVQRKLAYEVTVLVRIFGNNVTTSDVRATLWVQAPDLREQY IGIANVQATDKDWVQMQGKFLLNGSPSKVVVYLEGP | |||
CBM22 | 199 | 340 | 1.49939e-43 |
NIIENSNLGNGTNGWFPLGNCTLSVQSGSPRIIPPMARDSLGPHESLSGRYLLVTNRTQTWMGPAQMITDKFKLFLTYQVSAWVRIGSGSTGPQNVNVAL SVDNQWVNGGQVEIADGRWHEICGSFRIEKQASKVMVYIQGP | |||
GH10 | 397 | 677 | 0 |
RQIQNDFPIGTCISRSNIDNEDFVDFFVKHFNWAVFGNELKWYWTEPQQGNLNYKDADEMLDLCQKNKIDTRGHCIFWEVDGNVQQWIKSLNKTDLMKAV QNRLNDLLTRYKGKFRHYDVNNEMLHGSFYQDRLGKDIRANMFKTAHQLDPSATLFVNDYHVEDGCDTRSSPEKYIQHILDLQQQGAPVGGIGIQGHIDS PVGPIVCSALDKLGTLGIPIWFTELDVSSTNEYVRADDLEVMLRETMAHPAIDGVMLWGFWELFMSRENSHLVDAEGELNE |
Full Sequence |
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Protein Sequence Length: 743 Download |
MENLPKINEG NHSEKIINKG CESTEDEDII INPQFDDGLN NWSGRGCKIA LHDSMEDGKI 60 LPKSGKFFAS ATDRTQSWNG IQQEITGRVQ RKLAYEVTVL VRIFGNNVTT SDVRATLWVQ 120 APDLREQYIG IANVQATDKD WVQMQGKFLL NGSPSKVVVY LEGPPPGTDI LVNTLVIKHA 180 AKTPPSTPPD CEIAAFGVNI IENSNLGNGT NGWFPLGNCT LSVQSGSPRI IPPMARDSLG 240 PHESLSGRYL LVTNRTQTWM GPAQMITDKF KLFLTYQVSA WVRIGSGSTG PQNVNVALSV 300 DNQWVNGGQV EIADGRWHEI CGSFRIEKQA SKVMVYIQGP ASGVDLMIAG LQIFAVDRQA 360 RFKYLRRQTD KIRKRDITLK FSGLDSIGNL GTLVRVRQIQ NDFPIGTCIS RSNIDNEDFV 420 DFFVKHFNWA VFGNELKWYW TEPQQGNLNY KDADEMLDLC QKNKIDTRGH CIFWEVDGNV 480 QQWIKSLNKT DLMKAVQNRL NDLLTRYKGK FRHYDVNNEM LHGSFYQDRL GKDIRANMFK 540 TAHQLDPSAT LFVNDYHVED GCDTRSSPEK YIQHILDLQQ QGAPVGGIGI QGHIDSPVGP 600 IVCSALDKLG TLGIPIWFTE LDVSSTNEYV RADDLEVMLR ETMAHPAIDG VMLWGFWELF 660 MSRENSHLVD AEGELNEAGK RFLALKQEWL SHSHGYADAQ GQFSFRGFSG TYKVEVVTLA 720 EKVSKTFVVD KGDSSLVVSI DL* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 6.0e-16 | 198 | 343 | 155 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
pfam02018 | CBM_4_9 | 2.0e-16 | 28 | 168 | 143 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 4.0e-36 | 386 | 656 | 298 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
smart00633 | Glyco_10 | 1.0e-80 | 436 | 682 | 268 | + Glycosyl hydrolase family 10. | ||
pfam00331 | Glyco_hydro_10 | 5.0e-82 | 399 | 686 | 308 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33301.1 | 1e-34 | 1 | 348 | 1 | 345 | putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] |
GenBank | AAX33301.1 | 0 | 19 | 742 | 192 | 915 | putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] |
GenBank | AAX33301.1 | 0.0000000007 | 199 | 353 | 30 | 180 | putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] |
RefSeq | XP_002301133.1 | 0 | 19 | 742 | 326 | 1049 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 27 | 353 | 1 | 314 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1i1x_A | 6e-30 | 434 | 655 | 47 | 268 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1i1w_A | 6e-30 | 434 | 655 | 47 | 268 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 2bnj_A | 2e-29 | 434 | 655 | 47 | 268 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
PDB | 1k6a_A | 3e-29 | 434 | 655 | 47 | 268 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
PDB | 1gor_A | 3e-29 | 434 | 655 | 47 | 268 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX570690 | 295 | 449 | 743 | 0 |
EX570691 | 281 | 449 | 729 | 0 |
EB442796 | 298 | 226 | 523 | 0 |
HO789518 | 277 | 442 | 718 | 0 |
EB442796 | 116 | 62 | 177 | 0.00000007 |
Sequence Alignments (This image is cropped. Click for full image.) |
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