y
Basic Information | |
---|---|
Species | Phaseolus vulgaris |
Cazyme ID | Phvul.001G032300.1 |
Family | CBM22 |
Protein Properties | Length: 929 Molecular Weight: 102916 Isoelectric Point: 6.6069 |
Chromosome | Chromosome/Scaffold: 01 Start: 3121181 End: 3127238 |
Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM22 | 42 | 180 | 2e-29 |
NILLNHDFSSGLSSWHLNSCSGYVISAETGAQGGISRELSANYAVITDRKECWQGLEQDITDRISTGYTYTVLACVGVSSLSQGSSDVLATLKLEYHDSA TSYLFIGRTSVNKDSWQKLEGTFSLSTMPDRVVFYLEGP | |||
CBM22 | 214 | 350 | 6.9e-33 |
NIIINPQFDDGLNNWSGRGCKIMLHDSMNDGKIVPKSGKFFASATERTQNWNGIQQDITGRVQRKLAYEVTASVRIFGNNVSTADVRATLWVQAPDLKEQ YIGIANLQATDKDWVTMQGKFLLNGSPSKVVLYLEGP | |||
CBM22 | 385 | 526 | 5.60519e-45 |
NIIENSTLADGTNGWFPLGNCTLSVKTGSPHIVPPMARDSLGPSELLSGRYILVTNRTQTWMGPAQIITDKVKLFLTYQVSAWVRIVSGSSGPQNVNVAL GVDNEWVNGGQTEVSDNTWHEIGGSFRIEKQPSKVMVYVQGP | |||
GH10 | 583 | 854 | 0 |
RQTQNDFPIGTCISRSNIDNEDFVDFMVKHFNWAVFGNELKWYWTEPQQGNFNYKDADDLLSLCQKHNIQTRGHCIFWDVDGVVQQWIKSLNNNDLMTAI QNRLNGLLTRYKGKFNHYDVNNEMLHGSFFQDRLGKDIRANMFKTANQLDPSATLFVNDYHVEDGCDTRSCPDKYIHHILDLQEQGAPVGGIGIQGHIDS PIGPIVSSSLDKLGILGLPIWFTELDVSSINEYVRADDLEVMLREAMAHPAVEGIMLWGFWELFMSRDNAHL |
Full Sequence |
---|
Protein Sequence Length: 929 Download |
MKRFSACCFT SRISKFHSHR KHNQSQIMAG NISDPSGSKG ANILLNHDFS SGLSSWHLNS 60 CSGYVISAET GAQGGISREL SANYAVITDR KECWQGLEQD ITDRISTGYT YTVLACVGVS 120 SLSQGSSDVL ATLKLEYHDS ATSYLFIGRT SVNKDSWQKL EGTFSLSTMP DRVVFYLEGP 180 APGVDLLIRS VEINCSTPNN NTTSTACVSA GDDNIIINPQ FDDGLNNWSG RGCKIMLHDS 240 MNDGKIVPKS GKFFASATER TQNWNGIQQD ITGRVQRKLA YEVTASVRIF GNNVSTADVR 300 ATLWVQAPDL KEQYIGIANL QATDKDWVTM QGKFLLNGSP SKVVLYLEGP PPGTDILLNN 360 LVLKHAAKTP PSSPPDVKNV TFGVNIIENS TLADGTNGWF PLGNCTLSVK TGSPHIVPPM 420 ARDSLGPSEL LSGRYILVTN RTQTWMGPAQ IITDKVKLFL TYQVSAWVRI VSGSSGPQNV 480 NVALGVDNEW VNGGQTEVSD NTWHEIGGSF RIEKQPSKVM VYVQGPASGV DLMVAGLQIF 540 PVDRHARLRY LKIQTNKIRK RDVILKFSGL DSGSYANTSV QVRQTQNDFP IGTCISRSNI 600 DNEDFVDFMV KHFNWAVFGN ELKWYWTEPQ QGNFNYKDAD DLLSLCQKHN IQTRGHCIFW 660 DVDGVVQQWI KSLNNNDLMT AIQNRLNGLL TRYKGKFNHY DVNNEMLHGS FFQDRLGKDI 720 RANMFKTANQ LDPSATLFVN DYHVEDGCDT RSCPDKYIHH ILDLQEQGAP VGGIGIQGHI 780 DSPIGPIVSS SLDKLGILGL PIWFTELDVS SINEYVRADD LEVMLREAMA HPAVEGIMLW 840 GFWELFMSRD NAHLVNAEGD INEAGKRFLA LKQEWLSHSR GHVDEQGQYN FRGFHGTYNV 900 QVVTPSKKIS KTFVLDKGDT PLVLSIDL* 960 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 5.0e-18 | 214 | 354 | 143 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
pfam02018 | CBM_4_9 | 5.0e-19 | 41 | 182 | 143 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 4.0e-34 | 583 | 842 | 282 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
smart00633 | Glyco_10 | 7.0e-78 | 622 | 868 | 268 | + Glycosyl hydrolase family 10. | ||
pfam00331 | Glyco_hydro_10 | 3.0e-78 | 587 | 872 | 306 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33301.1 | 0 | 22 | 928 | 10 | 915 | putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] |
RefSeq | XP_002283550.1 | 0 | 20 | 928 | 78 | 981 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301133.1 | 0 | 25 | 928 | 147 | 1049 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 42 | 534 | 2 | 479 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 213 | 539 | 1 | 314 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xyz_B | 2e-29 | 591 | 842 | 39 | 307 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 1xyz_A | 2e-29 | 591 | 842 | 39 | 307 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 1nq6_A | 9e-28 | 591 | 863 | 15 | 291 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1i1x_A | 2e-27 | 620 | 841 | 47 | 268 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1i1w_A | 2e-27 | 620 | 841 | 47 | 268 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO789518 | 281 | 628 | 908 | 0 |
EX570690 | 295 | 635 | 929 | 0 |
EX570691 | 281 | 635 | 915 | 0 |
EB442796 | 298 | 412 | 709 | 0 |
HO789518 | 36 | 897 | 929 | 0.041 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|