y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00052298m |
Family | CE6 |
Protein Properties | Length: 176 Molecular Weight: 18708.2 Isoelectric Point: 4.277 |
Chromosome | Chromosome/Scaffold: 0108769 Start: 1 End: 2751 |
Description | Domain of unknown function (DUF303) |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE6 | 2 | 97 | 2.4e-25 |
PFAHRLLEDAGSGESSLVLGLVPAAVGGTRIWMWAKGEPLYEAAVARARAALAAGGGTLAAVLWFQGESDTIELDDATAYGGRMERLVNDFRADLG |
Full Sequence |
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Protein Sequence Length: 176 Download |
MPFAHRLLED AGSGESSLVL GLVPAAVGGT RIWMWAKGEP LYEAAVARAR AALAAGGGTL 60 AAVLWFQGES DTIELDDATA YGGRMERLVN DFRADLGIPD LLVIQVGLAS GEGNYTDIVR 120 EGQKNIKLPN VILVDAIGLP LQDDQLHLST EAQLWLGDML GQAYLKFNSS TDSRQ* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03629 | DUF303 | 3.0e-19 | 3 | 167 | 196 | + Domain of unknown function (DUF303). Distribution of this domain seems limited to prokaryotes and viruses. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAE01778.2 | 0 | 1 | 173 | 111 | 280 | OSJNBa0027H06.16 [Oryza sativa (japonica cultivar-group)] |
EMBL | CAH67782.1 | 0 | 1 | 173 | 111 | 280 | H0201G08.9 [Oryza sativa (indica cultivar-group)] |
GenBank | EEC76648.1 | 0 | 1 | 173 | 114 | 283 | hypothetical protein OsI_14598 [Oryza sativa Indica Group] |
GenBank | EEE60387.1 | 0 | 1 | 173 | 114 | 283 | hypothetical protein OsJ_13540 [Oryza sativa Japonica Group] |
RefSeq | XP_002446042.1 | 0 | 1 | 175 | 116 | 293 | hypothetical protein SORBIDRAFT_06g000860 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2apj_D | 2.8026e-45 | 17 | 165 | 110 | 256 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
PDB | 2apj_C | 2.8026e-45 | 17 | 165 | 110 | 256 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
PDB | 2apj_B | 2.8026e-45 | 17 | 165 | 110 | 256 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
PDB | 2apj_A | 2.8026e-45 | 17 | 165 | 110 | 256 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
PDB | 1zmb_F | 0.00000000001 | 19 | 165 | 72 | 225 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV490530 | 176 | 1 | 176 | 0 |
AI947879 | 176 | 1 | 176 | 0 |
FL896719 | 158 | 19 | 176 | 0 |
FL768635 | 149 | 28 | 176 | 0 |
FL768634 | 149 | 28 | 176 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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