y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00027382m |
Family | AA2 |
Protein Properties | Length: 323 Molecular Weight: 33882.1 Isoelectric Point: 6.1037 |
Chromosome | Chromosome/Scaffold: 035015 Start: 4521 End: 5871 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 52 | 303 | 0 |
GSDPRMGASLLRLFFHDCFVQGCDASILLDDVGTFVGEKTALPNANSVRGYDVINNIKAAVEASCPGIVSCADIVALAARDGTVLLGGPTWNVSLGRRDS TTASKDEANRDLPSPAANLSALITAFGNKGLSAQDMTALSGAHTVGFTQCRVYRGRIYNDTNINQPFAKLRQSNCPATPGVNDTVLAPLDLQTELAFDNA YYGDLLKSKGLLHSDQELYNGGSQDTLVKKYSSNSAAFFADFVTAMIKMGNI |
Full Sequence |
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Protein Sequence Length: 323 Download |
MASSTSGHCL FLAALLLLSS AAYGQQLSTS FYATSCPSFE STVRSVVSSA IGSDPRMGAS 60 LLRLFFHDCF VQGCDASILL DDVGTFVGEK TALPNANSVR GYDVINNIKA AVEASCPGIV 120 SCADIVALAA RDGTVLLGGP TWNVSLGRRD STTASKDEAN RDLPSPAANL SALITAFGNK 180 GLSAQDMTAL SGAHTVGFTQ CRVYRGRIYN DTNINQPFAK LRQSNCPATP GVNDTVLAPL 240 DLQTELAFDN AYYGDLLKSK GLLHSDQELY NGGSQDTLVK KYSSNSAAFF ADFVTAMIKM 300 GNINPLTGTS GQIRANCAVV NN* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00314 | plant_peroxidase_like | 2.0e-32 | 41 | 302 | 291 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam00141 | peroxidase | 1.0e-70 | 43 | 196 | 154 | + Peroxidase. | ||
PLN03030 | PLN03030 | 2.0e-77 | 24 | 321 | 310 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 4.0e-158 | 26 | 320 | 302 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD28869.1 | 0 | 1 | 322 | 1 | 326 | putative bacterial-induced peroxidase precursor [Oryza sativa Japonica Group] |
RefSeq | NP_001046400.1 | 0 | 1 | 322 | 9 | 334 | Os02g0240100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130666.1 | 0 | 1 | 322 | 1 | 323 | hypothetical protein LOC100191769 [Zea mays] |
RefSeq | XP_002451850.1 | 0 | 2 | 321 | 3 | 323 | hypothetical protein SORBIDRAFT_04g008650 [Sorghum bicolor] |
RefSeq | XP_002453592.1 | 0 | 20 | 322 | 19 | 320 | hypothetical protein SORBIDRAFT_04g008630 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1sch_B | 0 | 26 | 321 | 1 | 294 | A Chain A, Peanut Peroxidase |
PDB | 1sch_A | 0 | 26 | 321 | 1 | 294 | A Chain A, Peanut Peroxidase |
PDB | 1qo4_A | 0 | 26 | 321 | 2 | 304 | A Chain A, Peanut Peroxidase |
PDB | 1pa2_A | 0 | 26 | 321 | 2 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 3atj_B | 0 | 26 | 321 | 2 | 306 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |