y
Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00024512m |
Family | AA2 |
Protein Properties | Length: 328 Molecular Weight: 34939.7 Isoelectric Point: 5.7611 |
Chromosome | Chromosome/Scaffold: 003315 Start: 1856 End: 2839 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA2 | 43 | 293 | 0 |
QVEDMVRSAVQAALRRNIQLTAGLLRIFFHDCFPQGCDASVLLAGERDVPPNGGSLQPEALQLIEDIRREVHGKCGGPKVSCADILALATRDAVVAAGLP FFPITRGRMDSRAPAPDVLRNLPSPFASVDELLDLFRRKGLADPADLVALSGGHTVGKAGCGVIRGNDDFSRGLAANCSASRSRKQSLDVITPDAFDNRY FVALRNREGVLESDQGLADHPRTRDTVRDYANDQQIFFTQFRASMMKLSQL |
Full Sequence |
---|
Protein Sequence Length: 328 Download |
MATRGALAMG LLLAAVSTAA AMAPMDGDDL LVDLQLQQDP CPQVEDMVRS AVQAALRRNI 60 QLTAGLLRIF FHDCFPQGCD ASVLLAGERD VPPNGGSLQP EALQLIEDIR REVHGKCGGP 120 KVSCADILAL ATRDAVVAAG LPFFPITRGR MDSRAPAPDV LRNLPSPFAS VDELLDLFRR 180 KGLADPADLV ALSGGHTVGK AGCGVIRGND DFSRGLAANC SASRSRKQSL DVITPDAFDN 240 RYFVALRNRE GVLESDQGLA DHPRTRDTVR DYANDQQIFF TQFRASMMKL SQLKPPAAAG 300 SFEIRRDCSR PNARVDGDAD AGLAASA* 360 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02879 | PLN02879 | 2.0e-20 | 102 | 293 | 196 | + L-ascorbate peroxidase | ||
cd00314 | plant_peroxidase_like | 2.0e-29 | 48 | 292 | 276 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
PLN03030 | PLN03030 | 1.0e-43 | 45 | 312 | 290 | + cationic peroxidase; Provisional | ||
pfam00141 | peroxidase | 1.0e-57 | 48 | 275 | 230 | + Peroxidase. | ||
cd00693 | secretory_peroxidase | 3.0e-104 | 45 | 310 | 290 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB53488.1 | 0 | 43 | 327 | 47 | 336 | CAA303715.1 protein [Oryza sativa] |
EMBL | CAH69303.1 | 0 | 43 | 327 | 51 | 340 | TPA: class III peroxidase 61 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001054339.1 | 0 | 43 | 327 | 51 | 340 | Os04g0688300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001145841.1 | 0 | 6 | 327 | 9 | 337 | hypothetical protein LOC100279351 [Zea mays] |
RefSeq | XP_002448825.1 | 0 | 32 | 318 | 38 | 320 | hypothetical protein SORBIDRAFT_06g033870 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1bgp_A | 0 | 30 | 312 | 9 | 305 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
PDB | 1sch_B | 0 | 41 | 312 | 11 | 294 | A Chain A, Peanut Peroxidase |
PDB | 1sch_A | 0 | 41 | 312 | 11 | 294 | A Chain A, Peanut Peroxidase |
PDB | 1qo4_A | 0 | 41 | 312 | 12 | 304 | A Chain A, Peanut Peroxidase |
PDB | 1pa2_A | 0 | 41 | 312 | 12 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |