y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00020462m |
Family | GT61 |
Protein Properties | Length: 393 Molecular Weight: 43861.3 Isoelectric Point: 8.283 |
Chromosome | Chromosome/Scaffold: 014452 Start: 9168 End: 10346 |
Description | Glycosyltransferase family 61 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT61 | 10 | 256 | 0 |
CNFSNIHSDICTMEGDLRIHGKSASVYVVSASTFRPENSTVTVQPYTRKWEKQTMSRIREVTMRSMPPAPYSFTIPPRCTVRHDVPAVVFSTGGCGSNFF HAMSDLVVPLYITSHEYNGRVQLLVTDYQPKWIAKFRPILATLSMYPVIDLDADTAVRCFPSAHVGLESHRMLGIDPGLSRNGYTMMGFRDFLRSALSLQ RPWTAPVSRSSGRKPRLVMVLRRHSRAITNEADVVTSMVDLGFEVVA |
Full Sequence |
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Protein Sequence Length: 393 Download |
VAAPISKLTC NFSNIHSDIC TMEGDLRIHG KSASVYVVSA STFRPENSTV TVQPYTRKWE 60 KQTMSRIREV TMRSMPPAPY SFTIPPRCTV RHDVPAVVFS TGGCGSNFFH AMSDLVVPLY 120 ITSHEYNGRV QLLVTDYQPK WIAKFRPILA TLSMYPVIDL DADTAVRCFP SAHVGLESHR 180 MLGIDPGLSR NGYTMMGFRD FLRSALSLQR PWTAPVSRSS GRKPRLVMVL RRHSRAITNE 240 ADVVTSMVDL GFEVVAAGPE DVSDMRRFAG VVNSCDAMVG VHGAGLTNMV FLPHNATVMQ 300 IIPWGDMKVA CRYDFGDPVP DMGLRYAEYE VTAEETTLND KYPRDHPVFT DPASLHRQGK 360 LWEIFLQGQN VTLDIGRFRG VMQQVYRSIT TE* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG4421 | COG4421 | 0.002 | 220 | 303 | 86 | + Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism] | ||
pfam04577 | DUF563 | 2.0e-17 | 107 | 303 | 200 | + Protein of unknown function (DUF563). Family of uncharacterized proteins. |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001057482.1 | 0 | 2 | 390 | 126 | 522 | Os06g0311000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002438484.1 | 0 | 1 | 392 | 107 | 495 | hypothetical protein SORBIDRAFT_10g020460 [Sorghum bicolor] |
RefSeq | XP_002438485.1 | 0 | 1 | 392 | 103 | 498 | hypothetical protein SORBIDRAFT_10g020470 [Sorghum bicolor] |
RefSeq | XP_002438486.1 | 0 | 1 | 392 | 86 | 478 | hypothetical protein SORBIDRAFT_10g020480 [Sorghum bicolor] |
RefSeq | XP_002464714.1 | 0 | 2 | 392 | 70 | 466 | hypothetical protein SORBIDRAFT_01g025290 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CX617320 | 214 | 184 | 393 | 0 |
CJ832529 | 236 | 157 | 390 | 0 |
GR352982 | 246 | 1 | 242 | 0 |
CX617400 | 158 | 1 | 158 | 0 |
DY375398 | 302 | 85 | 379 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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