y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00019978m |
Family | GT37 |
Protein Properties | Length: 577 Molecular Weight: 62992.4 Isoelectric Point: 8.4763 |
Chromosome | Chromosome/Scaffold: 027823 Start: 3710 End: 5672 |
Description | fucosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT37 | 86 | 549 | 0 |
LATVPDPGDRLLGGLLAPEFDESSCLNRYRAALYRRPSVHAISSHLVSALRRYESLHRRCGPGTPAYARAVERLRAAAAPNASAAAAPSSSSSAAGCSYL VWNPIEGLGNHILTITSGFLYALLTDRVLLLHSSGGALDDLFCEPFPGSTWILEEDESFPILGMGHLTAGHHASLRSVLRRGEDLGGAPWLYVHLRHDYR KVHQDQQFFCDDVQAQLRRVPWLVFQSDNYFVTGLFLVPGLERELHRMFPRRDVVFHHLGRYLFHPSNTVWGMATRYHDEYYAKADERVGIQVRRFRWAP ISADELYGQILNCSQREGILPVPAAAATAAGGSNDGGQPAKQKAVLVVSLHGEYSEKLRELYQKNGSAGREAVSVHQPTHLGAQRSGEQQHNQKALAEMV LLSFSDAVVTTAVSTFGYVGQGLAGLRPWVLLTPVDGKAPDTPCRHAATMEPCFHAPPNYDCRA |
Full Sequence |
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Protein Sequence Length: 577 Download |
MDQNKAIRSH LSPCRGLEAR RRWYRAAAAR PTVLVVAASV AAALLMAGVL FGVRLTPSGG 60 NSTWVSAGVR DVLKAGTHND GTAGPLATVP DPGDRLLGGL LAPEFDESSC LNRYRAALYR 120 RPSVHAISSH LVSALRRYES LHRRCGPGTP AYARAVERLR AAAAPNASAA AAPSSSSSAA 180 GCSYLVWNPI EGLGNHILTI TSGFLYALLT DRVLLLHSSG GALDDLFCEP FPGSTWILEE 240 DESFPILGMG HLTAGHHASL RSVLRRGEDL GGAPWLYVHL RHDYRKVHQD QQFFCDDVQA 300 QLRRVPWLVF QSDNYFVTGL FLVPGLEREL HRMFPRRDVV FHHLGRYLFH PSNTVWGMAT 360 RYHDEYYAKA DERVGIQVRR FRWAPISADE LYGQILNCSQ REGILPVPAA AATAAGGSND 420 GGQPAKQKAV LVVSLHGEYS EKLRELYQKN GSAGREAVSV HQPTHLGAQR SGEQQHNQKA 480 LAEMVLLSFS DAVVTTAVST FGYVGQGLAG LRPWVLLTPV DGKAPDTPCR HAATMEPCFH 540 APPNYDCRAR ANGDVDRIVR HIRHCEDLPQ GVQLVE* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd11548 | NodZ_like | 0.0002 | 185 | 513 | 334 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
pfam03254 | XG_FTase | 0 | 80 | 549 | 475 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
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GO Term | Description |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
GO:0016020 | membrane |
GO:0042546 | cell wall biogenesis |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ30901.1 | 0 | 59 | 576 | 63 | 594 | hypothetical protein OsJ_14976 [Oryza sativa Japonica Group] |
RefSeq | NP_001052928.1 | 0 | 56 | 576 | 59 | 586 | Os04g0449100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001052929.1 | 0 | 59 | 576 | 63 | 582 | Os04g0449200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147440.1 | 0 | 1 | 576 | 1 | 578 | fucosyltransferase 7 [Zea mays] |
RefSeq | XP_002447927.1 | 0 | 1 | 576 | 1 | 583 | hypothetical protein SORBIDRAFT_06g018250 [Sorghum bicolor] |