y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00004639m |
Family | GT76 |
Protein Properties | Length: 278 Molecular Weight: 30809.7 Isoelectric Point: 8.7712 |
Chromosome | Chromosome/Scaffold: 017476 Start: 1229 End: 3431 |
Description | transferases, transferring hexosyl groups |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT76 | 77 | 277 | 0 |
VGFLRYFEVKQLPNFLLASPVLSLAIYSIIHYTKMLLQLLQTTSIHRQIITALEERSTESYKKTDDMTVLRSEFSAGLTNKAHGNSKVKQRKSVATETAS ATFHDTLSANQNVKDNQDEGSILLVPFVLHLAFMTFTAFFVMHVQVSTRFLSASPPIYWAAAHILASPNCSSKRWGYLICVYFIAYILLGSLLFSNFYPF T |
Full Sequence |
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Protein Sequence Length: 278 Download |
MRMFPPETTA TDCIQIVASL LAREVPPASC ASIDVAFAAA RLHPLPQGGV CSGHRTDGYT 60 RDDTLRVLVS VCQRLAVGFL RYFEVKQLPN FLLASPVLSL AIYSIIHYTK MLLQLLQTTS 120 IHRQIITALE ERSTESYKKT DDMTVLRSEF SAGLTNKAHG NSKVKQRKSV ATETASATFH 180 DTLSANQNVK DNQDEGSILL VPFVLHLAFM TFTAFFVMHV QVSTRFLSAS PPIYWAAAHI 240 LASPNCSSKR WGYLICVYFI AYILLGSLLF SNFYPFT* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam04188 | Mannosyl_trans2 | 1.0e-8 | 77 | 112 | 36 | + Mannosyltransferase (PIG-V)). This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI. | ||
pfam04188 | Mannosyl_trans2 | 4.0e-18 | 203 | 277 | 83 | + Mannosyltransferase (PIG-V)). This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI. |
Gene Ontology | |
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GO Term | Description |
GO:0005789 | endoplasmic reticulum membrane |
GO:0006506 | GPI anchor biosynthetic process |
GO:0016021 | integral to membrane |
GO:0016758 | transferase activity, transferring hexosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC17633.1 | 5.00264e-43 | 49 | 277 | 275 | 492 | Contains similarity to hypothetical protein C18b11.05 gb |
GenBank | EAZ20567.1 | 0 | 76 | 277 | 293 | 485 | hypothetical protein OsJ_36176 [Oryza sativa Japonica Group] |
RefSeq | NP_001066813.1 | 0 | 76 | 277 | 294 | 486 | Os12g0498700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002304011.1 | 9.94922e-44 | 49 | 277 | 276 | 483 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002457969.1 | 0 | 76 | 277 | 295 | 495 | hypothetical protein SORBIDRAFT_03g024000 [Sorghum bicolor] |