y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000585054 |
Family | CBM53 |
Protein Properties | Length: 288 Molecular Weight: 34039.3 Isoelectric Point: 6.0781 |
Chromosome | Chromosome/Scaffold: 015836235 Start: 2615 End: 3639 |
Description | starch synthase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM53 | 1 | 63 | 4.6e-22 |
MMGAFNDWRWKSFTFRLNKTQLKGDWWSCRFHVPKESYKINFVFFNGQNVYDNNDAKDFYITV | |||
CBM53 | 156 | 244 | 6e-35 |
LVKLYYNRSSGPLAHAKELWVHGGHNGWMDGLSIVERLVSSERKDGDWWYANVVVPEQAVVLDWVFADGPPQNAVLYDNNHRHDFHAIV |
Full Sequence |
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Protein Sequence Length: 288 Download |
MMGAFNDWRW KSFTFRLNKT QLKGDWWSCR FHVPKESYKI NFVFFNGQNV YDNNDAKDFY 60 ITVEGGMDLF AFEDFLLEEK RKEQEKLAKE RAERERQAEE QRRIEAEKAA SEADRAQAKA 120 EIAKRRQMVQ ELIKKAVRSV EDVWHIEPRE FNGEDLVKLY YNRSSGPLAH AKELWVHGGH 180 NGWMDGLSIV ERLVSSERKD GDWWYANVVV PEQAVVLDWV FADGPPQNAV LYDNNHRHDF 240 HAIVPKSIPE ELYWVEEEHQ IYKKLQEERR LKEEAIRAKV SLTEKYA* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02316 | PLN02316 | 2.0e-10 | 124 | 258 | 138 | + synthase/transferase | ||
PLN02316 | PLN02316 | 2.0e-17 | 1 | 251 | 259 | + synthase/transferase | ||
pfam03423 | CBM_25 | 2.0e-20 | 1 | 64 | 65 | + Carbohydrate binding domain (family 25). | ||
pfam03423 | CBM_25 | 2.0e-30 | 154 | 245 | 92 | + Carbohydrate binding domain (family 25). | ||
PLN02316 | PLN02316 | 2.0e-138 | 1 | 285 | 285 | + synthase/transferase |
Gene Ontology | |
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GO Term | Description |
GO:2001070 | starch binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002305571.1 | 0 | 1 | 285 | 156 | 440 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002305571.1 | 0.0000000000002 | 3 | 251 | 333 | 566 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002305571.1 | 0.00002 | 61 | 244 | 47 | 218 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518476.1 | 0.0000000001 | 1 | 251 | 372 | 607 | starch synthase, putative [Ricinus communis] |
RefSeq | XP_002518476.1 | 0 | 1 | 283 | 205 | 479 | starch synthase, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO795466 | 279 | 1 | 279 | 0 |
HO778003 | 285 | 1 | 285 | 0 |
EE287027 | 260 | 3 | 262 | 0 |
FN729022 | 264 | 1 | 260 | 0 |
HO778003 | 257 | 3 | 251 | 0.0000002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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