y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000501865 |
Family | CBM43 |
Protein Properties | Length: 480 Molecular Weight: 52570.4 Isoelectric Point: 6.5266 |
Chromosome | Chromosome/Scaffold: 002097322 Start: 3160 End: 4725 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 366 | 445 | 2e-24 |
WCVLNSSVKNLSQTQAELNYACAESDCTSLGSGRSCNLDQQGNVSYAFNXYFQTRDQDVRACDFNGTATITKSNPSVGDC | |||
GH17 | 24 | 342 | 0 |
LGVNWGTMSSHLLPPKKVVQMLKDNGIKKVKLFDAEPXTLNALAGSGIQVMVGIPNEKLEKLADSYSEAQEWVKENVTEWLRDGGVSISNVGVGNEPYLT SYNGTYVKTTYPALKNIQKALDESGAGGKVKATVPFNADVYESXSNKPSDGCFRKDIKNNMVEILRHLRDSKAPFVVNIYPFLSLYQNADFPQEFAFFEG GSKPVRDNNIEYKNVFDANCDTLINALKKEGFGNMEIVIGEVGWPTDGDKNANIKNAKKFYDGLLKKLGKEEGTPLRKGKIEVYLFGLFDEDXKSVAPGD FERHWGIFRYDGQPKXPMD |
Full Sequence |
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Protein Sequence Length: 480 Download |
MARAVFLVWA LSVILATTNL AQGLGVNWGT MSSHLLPPKK VVQMLKDNGI KKVKLFDAEP 60 XTLNALAGSG IQVMVGIPNE KLEKLADSYS EAQEWVKENV TEWLRDGGVS ISNVGVGNEP 120 YLTSYNGTYV KTTYPALKNI QKALDESGAG GKVKATVPFN ADVYESXSNK PSDGCFRKDI 180 KNNMVEILRH LRDSKAPFVV NIYPFLSLYQ NADFPQEFAF FEGGSKPVRD NNIEYKNVFD 240 ANCDTLINAL KKEGFGNMEI VIGEVGWPTD GDKNANIKNA KKFYDGLLKK LGKEEGTPLR 300 KGKIEVYLFG LFDEDXKSVA PGDFERHWGI FRYDGQPKXP MDLSGKGSGN QMLKAVQGVE 360 YLDKQWCVLN SSVKNLSQTQ AELNYACAES DCTSLGSGRS CNLDQQGNVS YAFNXYFQTR 420 DQDVRACDFN GTATITKSNP SVGDCLFPVQ IVGAGASRHG AVGAAYALSI FAGLLWMMI* 480 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0807 | RibA | 0.005 | 43 | 89 | 47 | + GTP cyclohydrolase II [Coenzyme metabolism] | ||
COG5309 | COG5309 | 9.0e-8 | 256 | 334 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-14 | 365 | 434 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-28 | 365 | 447 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-74 | 24 | 342 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62816.1 | 0 | 1 | 455 | 1 | 458 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002275701.1 | 0 | 1 | 455 | 1 | 458 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310612.1 | 0 | 1 | 475 | 1 | 478 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002438620.1 | 0 | 15 | 454 | 32 | 469 | hypothetical protein SORBIDRAFT_10g022940 [Sorghum bicolor] |
RefSeq | XP_002530257.1 | 0 | 1 | 455 | 1 | 459 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 22 | 344 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur8_A | 0 | 22 | 344 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_B | 0 | 22 | 344 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 22 | 344 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 22 | 344 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |